RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 C1QTNF5Q9BXJ0 243 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 PURGQ9UJV8 347 aaKnown RBP11.42□□□□□ -0.58
CLK3-216ENST00000564468 COMMD3-BMI1R4GMX3 469 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 IGHV4-61A0A0C4DH41 118 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 IGHV1-69-2A0A0G2JMI3 117 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 A8MV72 311 aaPredicted RBP11.41□□□□□ -0.58
CLK3-216ENST00000564468 F5H5K5 113 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 LYNX1G3V0Z9 82 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 ZNF593O00488 134 aaPredicted RBP11.41□□□□□ -0.58
CLK3-216ENST00000564468 EBAG9O00559 213 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 SURF4O15260 269 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 SPRY3O43610 288 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 NCR1O76036 304 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 GLCEO94923 617 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 IGHV1-46P01743 117 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 GYPBP06028 91 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 SPARCP09486 303 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 LYNX1P0DP58 116 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 SELEP16581 610 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 COL8A2P25067 703 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 CDK5Q00535 292 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 SLC3A1Q07837 685 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 MALLQ13021 153 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 TSTQ16762 297 aaKnown RBP11.41□□□□□ -0.58
CLK3-216ENST00000564468 PCK2Q16822 640 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 HFEQ30201 348 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 ACSM5Q6NUN0 579 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 COLCA1Q6ZS62 124 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 ASRGL1Q7L266 308 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 SHFQ7M4L6 423 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 ZDHHC13Q8IUH4 622 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 C10orf67Q8IYJ2 551 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 PARP8Q8N3A8 854 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 IQCF1Q8N6M8 205 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 HPS1Q92902 700 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 CMBLQ96DG6 245 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 HCAR1Q9BXC0 346 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 PRRG3Q9BZD7 231 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 NTN4Q9HB63 628 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 SLC25A19Q9HC21 320 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 PAPOLBQ9NRJ5 636 aaKnown RBP11.41□□□□□ -0.58
CLK3-216ENST00000564468 ZNF275Q9NSD4 429 aaPredicted RBP11.41□□□□□ -0.58
CLK3-216ENST00000564468 ENOPH1Q9UHY7 261 aa11.41□□□□□ -0.58
CLK3-216ENST00000564468 G3V2T6 193 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 M0R135 149 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 PPIHO43447 177 aaKnown RBP11.4□□□□□ -0.58
CLK3-216ENST00000564468 LILRA1O75019 489 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 APOC1P02654 83 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 LCATP04180 440 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 CD55P08174 381 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 ACSM4P0C7M7 580 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 IGHV4-31P0DP07 118 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 SLC15A1P46059 708 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 CRISP1P54107 249 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 ESRRGP62508 458 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 CDK5R2Q13319 367 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 CCNIQ14094 377 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 TAF13Q15543 124 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 KRTAP27-1Q3LI81 207 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 C6orf52Q5T4I8 152 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 FAHD1Q6P587 224 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 USP51Q70EK9 711 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 DCXRQ7Z4W1 244 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 ZNF511Q8NB15 262 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 ZNRF4Q8WWF5 429 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 YIPF5Q969M3 257 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 ZNF799Q96GE5 643 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 TIMD4Q96H15 378 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 MAP6Q96JE9 813 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 INTS14Q96SY0 518 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 OR51V1Q9H2C8 321 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 WDR76Q9H967 626 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 PNRC2Q9NPJ4 139 aaKnown RBP11.4□□□□□ -0.58
CLK3-216ENST00000564468 DDX28Q9NUL7 540 aaKnown RBP11.4□□□□□ -0.58
CLK3-216ENST00000564468 PTTG3PQ9NZH4 202 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 DOCK11Q5JSL3 2073 aa11.4□□□□□ -0.58
CLK3-216ENST00000564468 ZSCAN5BA6NJL1 495 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 FAM183AA6NL82 134 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 CLDN25C9JDP6 229 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 ZNF878C9JN71 531 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 PRODHO43272 600 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 CDC14BO60729 498 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 RP2O75695 350 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 IFNA2P01563 188 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 CLUP10909 449 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 GSTT1P30711 240 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 SLC6A9P48067 706 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 DAPP51397 102 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 TNFAIP6P98066 277 aaPredicted RBP11.39□□□□□ -0.59
CLK3-216ENST00000564468 DBPQ10586 325 aaPredicted RBP11.39□□□□□ -0.59
CLK3-216ENST00000564468 RSPO1Q2MKA7 263 aaPredicted RBP11.39□□□□□ -0.59
CLK3-216ENST00000564468 SLC35D3Q5M8T2 416 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 LINC01590Q5TEZ4 76 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 DRAM2Q6UX65 266 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 RHOUQ7L0Q8 258 aa11.39□□□□□ -0.59
CLK3-216ENST00000564468 PEG10Q86TG7 708 aaKnown RBP11.39□□□□□ -0.59
CLK3-216ENST00000564468 ERI1Q8IV48 349 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms