RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 FOXJ3Q9UPW0 622 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 NDUFAF1Q9Y375 327 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 STAB2Q8WWQ8 2551 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 A0A1W2PRG6 482 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 PRORSD1PA6NEY8 169 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 BBIP1A8MTZ0 92 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 MCIDASD6RGH6 385 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 H7C1C5 153 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 K7EIL1 84 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 FBP2O00757 339 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 IMPA2O14732 288 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 CCDC22O60826 627 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 FAM20BO75063 409 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 MT-ND1P03886 318 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 UMPSP11172 480 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 ZNF26P17031 533 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-204ENST00000563739 TNFRSF1BP20333 461 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 TNFSF4P23510 183 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 GATA4P43694 442 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 DAP3P51398 398 aaKnown RBP8.52□□□□□ -1.05
SF3B3-204ENST00000563739 LOXL3P58215 753 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 LCN6P62502 163 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 CD47Q08722 323 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 LAPTM4AQ15012 233 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 RSPO1Q2MKA7 263 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-204ENST00000563739 VAX1Q5SQQ9 334 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 CCBE1Q6UXH8 406 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-204ENST00000563739 DCDC5Q6ZRR9 648 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 REC114Q7Z4M0 266 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 IGFN1Q86VF2 1251 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 KRT73Q86Y46 540 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 OR8G5Q8NG78 346 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 PPP1R35Q8TAP8 253 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 Q8TCH9 128 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 LHX4Q969G2 390 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 PHF21AQ96BD5 680 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 ALG12Q9BV10 488 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 TXNIPQ9H3M7 391 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 PTTG3PQ9NZH4 202 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 SELENONQ9NZV5 590 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 ANGPT4Q9Y264 503 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 HIF3AQ9Y2N7 669 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 TIMM10BQ9Y5J6 103 aa8.52□□□□□ -1.05
SF3B3-204ENST00000563739 IQCF6A8MYZ5 107 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 IFNL4K9M1U5 179 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 FXYD1O00168 92 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 DOK2O60496 412 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 DCTN3O75935 186 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 TOX4O94842 621 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 IGF2P01344 180 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 HLA-DPB1P04440 258 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 RAC2P15153 192 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 GSTM3P21266 225 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 MSR1P21757 451 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 PPIBP23284 216 aaKnown RBP8.51□□□□□ -1.05
SF3B3-204ENST00000563739 HTR5AP47898 357 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 GZMMP51124 257 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 ARHGDIAP52565 204 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 TOP3AQ13472 1001 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-204ENST00000563739 NFYCQ13952 458 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 HERPUD1Q15011 391 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 MPPED2Q15777 294 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 CCDC92Q53HC0 331 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-204ENST00000563739 PRAMEF6Q5VXH4 476 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 CRIP3Q6Q6R5 217 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 ZER1Q7Z7L7 766 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 PDZD9Q8IXQ8 264 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 C11orf44Q8N8P7 122 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 TBC1D15Q8TC07 691 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 WIPF2Q8TF74 440 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-204ENST00000563739 GATAD2BQ8WXI9 593 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 AJUBAQ96IF1 538 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 PLEKHA8Q96JA3 519 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 MPP4Q96JB8 637 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 CGREF1Q99674 301 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 MYLK2Q9H1R3 596 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 RASSF4Q9H2L5 321 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 EVA1AQ9H8M9 152 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 VPREB3Q9UKI3 123 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 NDRG4Q9ULP0 352 aaKnown RBP8.51□□□□□ -1.05
SF3B3-204ENST00000563739 CORO2BQ9UQ03 480 aa8.51□□□□□ -1.05
SF3B3-204ENST00000563739 A0A1W2PPL8 197 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 M0QX08 132 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 MRASO14807 208 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 MTPNP58546 118 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 RPL27P61353 136 aaKnown RBP8.5□□□□□ -1.05
SF3B3-204ENST00000563739 BNIP1Q12981 228 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 CYLC2Q14093 348 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-204ENST00000563739 KRTAP27-1Q3LI81 207 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 SLC35E4Q6ICL7 350 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 UNQ6126/PRO20091Q6UXV3 157 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 SYT9Q86SS6 491 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 LYG1Q8N1E2 194 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 PNKDQ8N490 385 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 SGTBQ96EQ0 304 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 KCNN2Q9H2S1 579 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 NECAP2Q9NVZ3 263 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 FBLN5Q9UBX5 448 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
SF3B3-204ENST00000563739 EVPLLA8MZ36 301 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms