RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PAQR5Q9NXK6 330 aaPredicted RBP3.94□□□□□ -1.78
SMG1-206ENST00000562668 TAS2R5Q9NYW4 299 aa3.94□□□□□ -1.78
SMG1-206ENST00000562668 RHCGQ9UBD6 479 aa3.94□□□□□ -1.78
SMG1-206ENST00000562668 ZNF629Q9UEG4 869 aaPredicted RBP3.94□□□□□ -1.78
SMG1-206ENST00000562668 FBXO9Q9UK97 447 aaPredicted RBP3.94□□□□□ -1.78
SMG1-206ENST00000562668 CLEC4AQ9UMR7 237 aa3.94□□□□□ -1.78
SMG1-206ENST00000562668 LYVE1Q9Y5Y7 322 aa3.94□□□□□ -1.78
SMG1-206ENST00000562668 SPIN1Q9Y657 262 aaPredicted RBP3.94□□□□□ -1.78
SMG1-206ENST00000562668 INTS1Q8N201 2190 aaKnown RBP3.94□□□□□ -1.78
SMG1-206ENST00000562668 FASNP49327 2511 aaKnown RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 FREM1Q5H8C1 2179 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 USP9YO00507 2555 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 CACNA1CQ13936 2221 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 SH3PXD2BA1X283 911 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 NKX2-6A6NCS4 301 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 ENO4A6NNW6 628 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 PMS2P5A8MQ11 134 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 A8MXE2 369 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 PDLIM1O00151 329 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 PLPP3O14495 311 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 CDC42EP2O14613 210 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TRAF3IP2O43734 574 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 OR2T1O43869 369 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 EIF1BO60739 113 aaKnown RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 PTP4A3O75365 173 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 FABP3P05413 133 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 GPIP06744 558 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 YES1P07947 543 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 MYOD1P15172 320 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 FUT1P19526 365 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 CHRNB4P30926 498 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 HOXA1P49639 335 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 CASP6P55212 293 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 OR2B6P58173 313 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TAS2R41P59536 307 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 ACTR3P61158 418 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 CSNK2A1P68400 391 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 SLC35A1P78382 337 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 GABPB1Q06547 395 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 ST3GAL3Q11203 375 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 ZP4Q12836 540 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TRAM2Q15035 370 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 RNPS1Q15287 305 aaKnown RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 SGCBQ16585 318 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 PDSS1Q5T2R2 415 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 OR2A2Q6IF42 318 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 PODNL1Q6PEZ8 512 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TTC33Q6PID6 262 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 XKRXQ6PP77 449 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 C5orf46Q6UWT4 87 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TFAP2EQ6VUC0 442 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 CCDC121Q6ZUS5 278 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TMPRSS11FQ6ZWK6 438 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 MBOAT2Q6ZWT7 520 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 ZER1Q7Z7L7 766 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TMEM179BQ7Z7N9 219 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 MYPOPQ86VE0 399 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 MEX3DQ86XN8 651 aaKnown RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 ZDHHC21Q8IVQ6 265 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 NRMQ8IXM6 262 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TMEM123Q8N131 208 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 GABRG1Q8N1C3 465 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 KDM8Q8N371 416 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 OR6K3Q8NGY3 331 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 TMEM239Q8WW34 195 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 ACOT11Q8WXI4 607 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 TMEM45BQ96B21 275 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 SEPHS2Q99611 448 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 LITAFQ99732 161 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 PIP5K1AQ99755 562 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 OPN3Q9H1Y3 402 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 KCNN2Q9H2S1 579 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 PPP1R3EQ9H7J1 279 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 CACYBPQ9HB71 228 aaKnown RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 CHST11Q9NPF2 352 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 GLRX2Q9NS18 164 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 BEX4Q9NWD9 120 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 FAM118AQ9NWS6 357 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 MRPL39Q9NYK5 338 aaKnown RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 RPS6KB2Q9UBS0 482 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 ZNF229Q9UJW7 825 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 SLC13A4Q9UKG4 626 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 MCTS1Q9ULC4 181 aaKnown RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 B3GALT5Q9Y2C3 310 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 GPR52Q9Y2T5 361 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 FAM96BQ9Y3D0 163 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 KLF2Q9Y5W3 355 aaPredicted RBP3.93□□□□□ -1.78
SMG1-206ENST00000562668 FLVCR1Q9Y5Y0 555 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 V9GYQ6 96 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 LRRK2Q5S007 2527 aa3.93□□□□□ -1.78
SMG1-206ENST00000562668 PCNX1Q96RV3 2341 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 RP1L1Q8IWN7 2480 aaPredicted RBP3.92□□□□□ -1.78
SMG1-206ENST00000562668 DHRS12A0PJE2 317 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 HTR3EA5X5Y0 456 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 KPNA4O00629 521 aaPredicted RBP3.92□□□□□ -1.78
SMG1-206ENST00000562668 FKBP6O75344 327 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 OR7A10O76100 309 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 VAMP5O95183 116 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 AHSA1O95433 338 aa3.92□□□□□ -1.78
SMG1-206ENST00000562668 SYNGR4O95473 234 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms