RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ZNF799Q96GE5 643 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 IL4I1Q96RQ9 567 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 MBOAT4Q96T53 435 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 COPS4Q9BT78 406 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 ABHD6Q9BV23 337 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 TOR3AQ9H497 397 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 H2AFY2Q9P0M6 372 aaPredicted RBP14.31□□□□□ -0.12
CLK3-207ENST00000562389 STARD10Q9Y365 291 aa14.31□□□□□ -0.12
CLK3-207ENST00000562389 SLC22A31A6NKX4 558 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 SSX4O60224 188 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 NAA10P41227 235 aaPredicted RBP14.3□□□□□ -0.12
CLK3-207ENST00000562389 GRB2P62993 217 aaKnown RBP14.3□□□□□ -0.12
CLK3-207ENST00000562389 SLC16A9Q7RTY1 509 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 FAM81AQ8TBF8 368 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 SNX33Q8WV41 574 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 KCNJ15Q99712 375 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 TMUB1Q9BVT8 246 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 YIPF3Q9GZM5 350 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 MYOZ1Q9NP98 299 aaPredicted RBP14.3□□□□□ -0.12
CLK3-207ENST00000562389 C8orf4Q9NR00 106 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 CENPMQ9NSP4 180 aa14.3□□□□□ -0.12
CLK3-207ENST00000562389 CGGBP1Q9UFW8 167 aaPredicted RBP14.3□□□□□ -0.12
CLK3-207ENST00000562389 LYNP07948 512 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 CSF3P09919 207 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 NAT2P11245 290 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 KITLGP21583 273 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 SLC15A1P46059 708 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 DSCR9P59020 149 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
CLK3-207ENST00000562389 PSG7Q13046 419 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 TAF13Q15543 124 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 TRIP10Q15642 601 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 ALKBH6Q3KRA9 238 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 DRAM2Q6UX65 266 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 FBXW12Q6X9E4 464 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 ZCCHC24Q8N2G6 241 aaKnown RBP14.29□□□□□ -0.12
CLK3-207ENST00000562389 TRUB1Q8WWH5 349 aaKnown RBP14.29□□□□□ -0.12
CLK3-207ENST00000562389 RDH12Q96NR8 316 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 AMELYQ99218 206 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 CNN2Q99439 309 aaKnown RBP14.29□□□□□ -0.12
CLK3-207ENST00000562389 TPK1Q9H3S4 243 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 HAO2Q9NYQ3 351 aa14.29□□□□□ -0.12
CLK3-207ENST00000562389 C17orf100A8MU93 164 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 MT-ND5P03915 603 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 LCATP04180 440 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 RAC2P15153 192 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 ALOX5APP20292 161 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 LIPAP38571 399 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 OPRL1P41146 370 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 SLC6A9P48067 706 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 MMP15P51511 669 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 CLEC2AQ6UVW9 174 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 SPATC1Q76KD6 591 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 NAA40Q86UY6 237 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 ZNF525Q8N782 197 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 THEM6Q8WUY1 208 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 HAVCR1Q96D42 359 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 CMBLQ96DG6 245 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 DLL4Q9NR61 685 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 CYSLTR2Q9NS75 346 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 IMPAD1Q9NX62 359 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 SMPD3Q9NY59 655 aaPredicted RBP14.28□□□□□ -0.12
CLK3-207ENST00000562389 PTTG3PQ9NZH4 202 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 WARS2Q9UGM6 360 aaKnown RBP14.28□□□□□ -0.12
CLK3-207ENST00000562389 LAMP5Q9UJQ1 280 aa14.28□□□□□ -0.12
CLK3-207ENST00000562389 PURGQ9UJV8 347 aaKnown RBP14.28□□□□□ -0.12
CLK3-207ENST00000562389 TRIM64A6NGJ6 449 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 TRIM64BA6NI03 449 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 CASQ2O14958 399 aaPredicted RBP14.27□□□□□ -0.13
CLK3-207ENST00000562389 TIMM8AO60220 97 aaPredicted RBP14.27□□□□□ -0.13
CLK3-207ENST00000562389 LY6HO94772 140 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 MRPL3P09001 348 aaKnown RBP14.27□□□□□ -0.13
CLK3-207ENST00000562389 CD99P14209 185 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 PEX2P28328 305 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 HSD11B1P28845 292 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 HTR1FP30939 366 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 PRKXP51817 358 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 TMED1Q13445 227 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 TNK1Q13470 666 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 SLC25A30Q5SVS4 291 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 PACRGLQ8N7B6 248 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 ZNF283Q8N7M2 679 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 ZNF582Q96NG8 517 aaPredicted RBP14.27□□□□□ -0.13
CLK3-207ENST00000562389 MNTQ99583 582 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 DCLRE1BQ9H816 532 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 ADGRL4Q9HBW9 690 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 NKIRAS2Q9NYR9 191 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 KLHDC2Q9Y2U9 406 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 GMPPBQ9Y5P6 360 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 TMEM14AQ9Y6G1 99 aa14.27□□□□□ -0.13
CLK3-207ENST00000562389 ZNF469Q96JG9 3925 aaPredicted RBP14.27□□□□□ -0.13
CLK3-207ENST00000562389 VPS13CQ709C8 3753 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 MED13LQ71F56 2210 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 PLSCR5A0PG75 271 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 DLGAP1O14490 977 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 SLC16A6O15403 523 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 APOC1P02654 83 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 ADH4P08319 380 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 H2BFMP0C1H6 154 aa14.26□□□□□ -0.13
CLK3-207ENST00000562389 CX3CR1P49238 355 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms