RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 H2AFB1P0C5Y9 115 aa12.5□□□□□ -0.41
VPS9D1-202ENST00000561976 GNB3P16520 340 aa12.5□□□□□ -0.41
VPS9D1-202ENST00000561976 PGCP20142 388 aa12.5□□□□□ -0.41
VPS9D1-202ENST00000561976 RAB6AP20340 208 aa12.5□□□□□ -0.41
VPS9D1-202ENST00000561976 BAP18Q8IXM2 172 aa12.5□□□□□ -0.41
VPS9D1-202ENST00000561976 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
VPS9D1-202ENST00000561976 ELP5Q8TE02 316 aa12.5□□□□□ -0.41
VPS9D1-202ENST00000561976 SOHLH2Q9NX45 425 aa12.5□□□□□ -0.41
VPS9D1-202ENST00000561976 TMED7-TICAM2A0A0A6YYA0 188 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 FGF16O43320 207 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 DUS4LO95620 317 aaKnown RBP12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 CRABP1P29762 137 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 RAB13P51153 203 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 TMEM244Q5VVB8 128 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 MARCH1Q8TCQ1 289 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 MICU1Q9BPX6 476 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 OR11A1Q9GZK7 315 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 TLNRD1Q9H1K6 362 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 G6PC2Q9NQR9 355 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 DOCK8Q8NF50 2099 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 LOC101059948A0A1B0GTJ6 334 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 FRG2CA6NGY1 282 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 CD1CP29017 333 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 FAHD2BQ6P2I3 314 aaPredicted RBP12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 OIT3Q8WWZ8 545 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 FAHD2AQ96GK7 314 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 UQCC2Q9BRT2 126 aa12.49□□□□□ -0.41
VPS9D1-202ENST00000561976 TDRD6O60522 2096 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 SNAPINO95295 136 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 H2BFMP0C1H6 154 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 CD37P11049 281 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 RABIFP47224 123 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 NR0B1P51843 470 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 C1orf140Q5VVS0 124 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 HLA-DQA1Q5Y7H0 255 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 OR52N4Q8NGI2 321 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 TSLPQ969D9 159 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 TCTN2Q96GX1 697 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 TEX13DA0A0J9YY54 714 aaPredicted RBP12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 LOC390937A0A1W2PQ73 354 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 TMEM150CB9EJG8 249 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 SRSF10O75494 262 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 AHSA1O95433 338 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 HLA-DOBP13765 273 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 FMODQ06828 376 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 UNC119Q13432 240 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 TMPPEQ6ZT21 453 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 PAQR4Q8N4S7 273 aaPredicted RBP12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 ZNF248Q8NDW4 579 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 OR10R2Q8NGX6 335 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 BIN3Q9NQY0 253 aa12.48□□□□□ -0.41
VPS9D1-202ENST00000561976 ZNF705EA8MWA4 302 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 F8VVB4 439 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 F8VWA3 439 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 PLPP3O14495 311 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 DXOO77932 396 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 ISG15P05161 165 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 MPZP25189 248 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 POLR2HP52434 150 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 OR4K15Q8NH41 348 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 CPNE2Q96FN4 548 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 A8MVM7 634 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 FARS2O95363 451 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 CD79AP11912 226 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 GALNSP34059 522 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 RFC3P40938 356 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 NPBWR1P48145 328 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 PNLIPRP2P54317 469 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 CYCSP99999 105 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 PLCXD2Q0VAA5 305 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 DHRS7BQ6IAN0 325 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 COX15Q7KZN9 410 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 ZNF101Q8IZC7 436 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 SLC30A7Q8NEW0 376 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 RRNAD1Q96FB5 475 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 PTGES2Q9H7Z7 377 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 HS3ST3A1Q9Y663 406 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 OR1D4P47884 311 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 SLC26A5P58743 744 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 TAS2R31P59538 309 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 SLC9A3R2Q15599 337 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 AWAT2Q6E213 333 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 ZNF585AQ6P3V2 769 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 RTN4RL2Q86UN3 420 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 SLC22A24Q8N4F4 322 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 ZSCAN4Q8NAM6 433 aaPredicted RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 OR4A4PQ8NGN8 299 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 C2CD4CQ8TF44 421 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 ROBO4Q8WZ75 1007 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 ADIPOR1Q96A54 375 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 RNF126Q9BV68 326 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 ESRP2Q9H6T0 727 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 FN3KRPQ9HA64 309 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 MMP26Q9NRE1 261 aa12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 CARHSP1Q9Y2V2 147 aaKnown RBP12.47□□□□□ -0.41
VPS9D1-202ENST00000561976 GON4LQ3T8J9 2241 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms