RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 LINC01555Q8NAE3 123 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 IPMKQ8NFU5 416 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 OR2T33Q8NG76 320 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 OR10A7Q8NGE5 316 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 OR2A1Q8NGT9 310 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 NANPQ8TBE9 248 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 ADAMTS16Q8TE57 1224 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 ANKRD49Q8WVL7 239 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 RAPGEF5Q92565 580 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 RNASE6Q93091 150 aaKnown RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 ZFP3Q96NJ6 502 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 QKIQ96PU8 341 aaKnown RBP eCLIP2.8□□□□□ -1.967e-7■■■■■ 28.1
HERC1-215ENST00000561436 OR2A5Q96R48 311 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 ZNF607Q96SK3 696 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 PAXXQ9BUH6 204 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 FRMD8P1Q9BZ68 369 aaPredicted RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 NXF5Q9H1B4 397 aaKnown RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 RHOJQ9H4E5 214 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 ZNF385DQ9H6B1 395 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 LRRC40Q9H9A6 602 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 CALHM2Q9HA72 323 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 MRPS30Q9NP92 439 aaKnown RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 ZNF107Q9UII5 783 aaPredicted RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 PDE10AQ9Y233 779 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 MRPS33Q9Y291 106 aaKnown RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 YARS2Q9Y2Z4 477 aaKnown RBP2.8□□□□□ -1.96
HERC1-215ENST00000561436 PPIAL4AQ9Y536 164 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 SMAD5-AS1Q9Y6J3 95 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 IKBKGQ9Y6K9 419 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 HCFC1P51610 2035 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 ADAMTS9Q9P2N4 1935 aa2.8□□□□□ -1.96
HERC1-215ENST00000561436 PLXNA2O75051 1894 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 A0A087X0T9 212 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 C15orf38-AP3S2A0A0A6YYH1 394 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 IGHV3-35A0A0C4DH35 117 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 A0A1W2PPV9 198 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TUBAL3A6NHL2 446 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 PCP4L1A6NKN8 68 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TNFSF11O14788 317 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 OR1F1O43749 312 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 CST8O60676 142 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 CDH16O75309 829 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 SCGNO76038 276 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 GLSO94925 669 aaPredicted RBP2.79□□□□□ -1.96
HERC1-215ENST00000561436 EPPINO95925 133 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 CATP04040 527 aaKnown RBP2.79□□□□□ -1.96
HERC1-215ENST00000561436 IGF1P05019 195 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TPM3P06753 285 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 FAM228BP0C875 321 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 CNR1P21554 472 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 NT5EP21589 574 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 MSNP26038 577 aaKnown RBP2.79□□□□□ -1.96
HERC1-215ENST00000561436 NTSP30990 170 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 CCR7P32248 378 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 FOXN2P32314 431 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 RPA3P35244 121 aaPredicted RBP2.79□□□□□ -1.96
HERC1-215ENST00000561436 OPRM1P35372 400 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 MDH2P40926 338 aaKnown RBP2.79□□□□□ -1.96
HERC1-215ENST00000561436 PI4KAP42356 2102 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 RGS4P49798 205 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 PPT1P50897 306 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 OR4D2P58180 307 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TPM4P67936 248 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 SPIBQ01892 262 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 SELPLGQ14242 412 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 GRB7Q14451 532 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 LAGE3Q14657 143 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 NSDHLQ15738 373 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 DEFB110Q30KQ9 67 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TTLL9Q3SXZ7 439 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 HSP90AA4PQ58FG1 418 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TTC23Q5W5X9 447 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 OPN5Q6U736 354 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 CES3Q6UWW8 571 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TFAP2EQ6VUC0 442 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 DNM1P46Q6ZS02 220 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 MOB1BQ7L9L4 216 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 MOB3BQ86TA1 216 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 CD177Q8N6Q3 437 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 OR5L2Q8NGL0 311 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 OR9A1PQ8NGU1 263 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 OR9A4Q8NGU2 314 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 OR51Q1Q8NH59 317 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 FBXO30Q8TB52 745 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 C8orf44Q96CB5 159 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TM4SF19Q96DZ7 209 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 KIR2DL4Q99706 377 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 SLC6A7Q99884 636 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 TBL1YQ9BQ87 522 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 ERP44Q9BS26 406 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 PLEKHF2Q9H8W4 249 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 ELOVL3Q9HB03 270 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 ANKHQ9HCJ1 492 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 SLC7A10Q9NS82 523 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 ZNF275Q9NSD4 429 aaPredicted RBP2.79□□□□□ -1.96
HERC1-215ENST00000561436 NUDT15Q9NV35 164 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 ZNHIT6Q9NWK9 470 aaKnown RBP2.79□□□□□ -1.96
HERC1-215ENST00000561436 KLHL21Q9UJP4 597 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 MMACHCQ9Y4U1 282 aa2.79□□□□□ -1.96
HERC1-215ENST00000561436 ZFHX3Q15911 3703 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms