RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SGCGQ13326 291 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 FAM3CQ92520 227 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 OR10C1Q96KK4 312 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 SMIM3Q9BZL3 60 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 PDE7BQ9NP56 450 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 PLA2G2EQ9NZK7 142 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 WRBO00258 174 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 LDLRAD4O15165 306 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 IGHV2-5P01817 119 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 KLK3P07288 261 aaPredicted RBP14.77□□□□□ -0.05
TPM1-228ENST00000560975 NME1P15531 152 aaKnown RBP14.77□□□□□ -0.05
TPM1-228ENST00000560975 RAB6AP20340 208 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 PRSS54Q6PEW0 395 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 ZNF615Q8N8J6 731 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 MAP3K3Q99759 626 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 RGCCQ9H4X1 137 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 ASH2LQ9UBL3 628 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 EMC9Q9Y3B6 208 aa14.77□□□□□ -0.05
TPM1-228ENST00000560975 GPR89AB7ZAQ6 455 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 GPR89BP0CG08 455 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 DVL1P1P54792 670 aaPredicted RBP14.76□□□□□ -0.05
TPM1-228ENST00000560975 CD226Q15762 336 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 BTNL8Q6UX41 500 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 THRSPQ92748 146 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 VSTM2LQ96N03 204 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 GAS2L1Q99501 681 aaPredicted RBP14.76□□□□□ -0.05
TPM1-228ENST00000560975 GGACTQ9BVM4 153 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 SLC5A7Q9GZV3 580 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 Q9N2J8 555 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 TIMM10BQ9Y5J6 103 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 FREM3P0C091 2139 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 FAM157AC9JC47 383 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 NPIPB9F8W1W9 429 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 XKRYO14609 159 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 SLC31A1O15431 190 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 SLC16A7O60669 478 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 ASAH2BP0C7U1 165 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 IGFBP3P17936 291 aaPredicted RBP14.76□□□□□ -0.05
TPM1-228ENST00000560975 GLP1RP43220 463 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 SLC6A9P48067 706 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 ACTR1AP61163 376 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 ERV3-1Q14264 604 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 SLC18B1Q6NT16 456 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 VITQ6UXI7 678 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 TAF8Q7Z7C8 310 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 LMF2Q9BU23 707 aaKnown RBP14.76□□□□□ -0.05
TPM1-228ENST00000560975 ZNF107Q9UII5 783 aaPredicted RBP14.76□□□□□ -0.05
TPM1-228ENST00000560975 AMDHD2Q9Y303 409 aa14.76□□□□□ -0.05
TPM1-228ENST00000560975 LOC101059948A0A1B0GTJ6 334 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 AP4M1O00189 453 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 PHYHO14832 338 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 YIF1AO95070 293 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 GSK3AP49840 483 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 RIDAP52758 137 aaKnown RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 C1QL3Q5VWW1 255 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 AWAT2Q6E213 333 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 FAHD2BQ6P2I3 314 aaPredicted RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 PSRC1Q6PGN9 363 aaPredicted RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 CLEC18BQ6UXF7 455 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 ATG4DQ86TL0 474 aaPredicted RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 BCORP1Q8N888 145 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 OR4K15Q8NH41 348 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 TAAR8Q969N4 342 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 FAHD2AQ96GK7 314 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 OCSTAMPQ9BR26 566 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 CNTD2Q9H8S5 307 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 SPACA1Q9HBV2 294 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 LRP12Q9Y561 859 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 KPTNQ9Y664 436 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 KNL1Q8NG31 2342 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 CDH23Q9H251 3354 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 A0A1W2PPE2 198 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 FOXS1O43638 330 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 MPZL1O95297 269 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 CTSBP07858 339 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 SFTPBP07988 381 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 HOXB5P09067 269 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 SLC35E2P0CK97 266 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 PAX6P26367 422 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 RAB2AP61019 212 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 SP3Q02447 781 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 TDGQ13569 410 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 WBP2NLQ6ICG8 309 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 CDPF1Q6NVV7 123 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 OR9A4Q8NGU2 314 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 FLVCR1-AS1Q8TAF5 88 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 ASB17Q8WXJ9 295 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 ZNF775Q96BV0 537 aaPredicted RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 SLC25A36Q96CQ1 311 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 CDC6Q99741 560 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 ZFYVE21Q9BQ24 234 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 RAB33BQ9H082 229 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 MRPL22Q9NWU5 206 aaKnown RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 SLC17A4Q9Y2C5 497 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 LOC107986453A0A1B0GWG9 222 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 TXNDC12O95881 172 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 CSTBP04080 98 aaKnown RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 PPM1AP35813 382 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 TEX30Q5JUR7 227 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms