RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 BEST4Q8NFU0 473 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR2AK2Q8NG84 335 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR52H1Q8NGJ2 320 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR52E2Q8NGJ4 325 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR5M9Q8NGP3 310 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR6K3Q8NGY3 331 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR51A7Q8NH64 312 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR1S1Q8NH92 325 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 MOSPD2Q8NHP6 518 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ZNF671Q8TAW3 534 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SYNPRQ8TBG9 265 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ZPLD1Q8TCW7 415 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 GPR148Q8TDV2 347 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 GRHL3Q8TE85 626 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TMEM171Q8WVE6 324 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ZNRF4Q8WWF5 429 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 FCAMRQ8WWV6 532 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 LCN9Q8WX39 176 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR1E3Q8WZA6 343 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 HERVK_113Q902F9 699 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ST8SIA4Q92187 359 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 FAM3CQ92520 227 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 PIGKQ92643 395 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 FGF13Q92913 245 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 HIST1H2ACQ93077 130 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 MCHR2Q969V1 340 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ANKRD9Q96BM1 317 aaPredicted RBP2.19□□□□□ -2.06
SPG11-223ENST00000560858 C3orf49Q96BT1 292 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SIPA1Q96FS4 1042 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 MSANTD3Q96H12 275 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 CXorf58Q96LI9 332 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 C4orf45Q96LM5 186 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 LINC00052Q96N35 136 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SFXN2Q96NB2 322 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ZFP3Q96NJ6 502 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR1F2PQ96R84 312 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TNFRSF13CQ96RJ3 184 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 GABRG3Q99928 467 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ARPC5LQ9BPX5 153 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ALG12Q9BV10 488 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 EDEM2Q9BV94 578 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TM2D2Q9BX73 214 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SLC17A9Q9BYT1 436 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TTTY10Q9BZA0 68 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 B3GNT4Q9C0J1 378 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SHARPINQ9H0F6 387 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 DNTTIP1Q9H147 329 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SLITRK2Q9H156 845 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ALX4Q9H161 411 aaPredicted RBP2.19□□□□□ -2.06
SPG11-223ENST00000560858 SLC25A18Q9H1K4 315 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SFXN1Q9H9B4 322 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SCPEP1Q9HB40 452 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 NOX3Q9HBY0 568 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 APMAPQ9HDC9 416 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SLC2A8Q9NY64 477 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TAS2R10Q9NYW0 307 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TAS2R8Q9NYW2 309 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 GDE1Q9NZC3 331 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 KLK11Q9UBX7 282 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TBC1D29Q9UFV1 150 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 STEAP1Q9UHE8 339 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 CYB5R1Q9UHQ9 305 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 MRM2Q9UI43 246 aaKnown RBP2.19□□□□□ -2.06
SPG11-223ENST00000560858 GNG8Q9UK08 70 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SCML1Q9UN30 329 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 PPIEQ9UNP9 301 aaKnown RBP2.19□□□□□ -2.06
SPG11-223ENST00000560858 FLVCR2Q9UPI3 526 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 MOKQ9UQ07 419 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 PRELID1Q9Y255 219 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 KLHDC2Q9Y2U9 406 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 AK6Q9Y3D8 172 aaKnown RBP2.19□□□□□ -2.06
SPG11-223ENST00000560858 ADAM18Q9Y3Q7 739 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 PCDHGA5Q9Y5G8 931 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 IER3IP1Q9Y5U9 82 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SESN1Q9Y6P5 492 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 COLEC10Q9Y6Z7 277 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SPACA6W5XKT8 324 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 PCDH15Q96QU1 1955 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RP1P56715 2156 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 A0A087WV48 116 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 KIR2DS5A0A0G2JLQ3 304 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 A0A0G2JNG1 304 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 A0A1B0GUV1 79 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 A0A1B0GW55 424 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 A0A1W2PPC1 479 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 A0A1W2PPK0 400 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 LOC390937A0A1W2PQ73 354 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RNF222A6NCQ9 220 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 NPIPB13A6NJU9 1138 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RFPL4AA6NLU0 287 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 ANXA2P2A6NMY6 339 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 A8MUA0 341 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 MPTX1A8MV57 137 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 C2orf74A8MZ97 194 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 IDSB3KWA1 339 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 NPIPB4C9JG80 1138 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 F5H5P2 479 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 RFPL4AL1F8VTS6 287 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 H0YGG7 62 aa2.18□□□□□ -2.06
SPG11-223ENST00000560858 KIR2DS3K7RE56 304 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms