RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 UBL3O95164 117 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 IGLV3-1P01715 115 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 APOC1P02654 83 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 YES1P07947 543 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 PMP22Q01453 160 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 SCRN3Q0VDG4 424 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 RAB35Q15286 201 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 RSPO1Q2MKA7 263 aaPredicted RBP11.34□□□□□ -0.59
SNX1-211ENST00000560829 ZNF627Q7L945 461 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 CHMP1BQ7LBR1 199 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 LRRC18Q8N456 261 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 ZNF283Q8N7M2 679 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 SLC25A38Q96DW6 304 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 PRRG4Q9BZD6 226 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 PRDM14Q9GZV8 571 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 EXO5Q9H790 373 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 CAMK2AQ9UQM7 478 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 SLC5A6Q9Y289 635 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 A0A1B0GVI7 797 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 LOC390937A0A1W2PQ73 354 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 TFECO14948 347 aaPredicted RBP11.33□□□□□ -0.6
SNX1-211ENST00000560829 CRYGSP22914 178 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 ECH1Q13011 328 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 C3AR1Q16581 482 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 TRIQKQ629K1 86 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 GLT8D1Q68CQ7 371 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 LYPD6Q86Y78 171 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 SLC22A24Q8N4F4 322 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 NKAIN3Q8N8D7 197 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 OR51E1Q8TCB6 317 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 RAB40AQ8WXH6 277 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 ABHD1Q96SE0 405 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 SLC17A5Q9NRA2 495 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 SLC7A10Q9NS82 523 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 PLEK2Q9NYT0 353 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 ZNF319Q9P2F9 582 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 CNOT1A5YKK6 2376 aaKnown RBP11.33□□□□□ -0.6
SNX1-211ENST00000560829 ZFHX4Q86UP3 3567 aa11.33□□□□□ -0.6
SNX1-211ENST00000560829 FUOMA2VDF0 154 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 CTDSPLO15194 276 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 KLK10O43240 276 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 SGCEO43556 437 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 SYNGR3O43761 229 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 DOK2O60496 412 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 LMX1BO60663 402 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 TPPPO94811 219 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 ITGA5P08648 1049 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 B4GALT1P15291 398 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 DDOSTP39656 456 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 CLDN12P56749 244 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 PCBD1P61457 104 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 PITPNAQ00169 270 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 MADCAM1Q13477 382 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 RSPO4Q2I0M5 234 aaPredicted RBP11.32□□□□□ -0.6
SNX1-211ENST00000560829 KRTAP27-1Q3LI81 207 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 HACD4Q5VWC8 232 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 Q6ZSR3 168 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 ADGRE4PQ86SQ3 457 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 LUZP2Q86TE4 346 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 SERPINA12Q8IW75 414 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 CMTM4Q8IZR5 234 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 PLPP7Q8NBV4 271 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 SPTSSAQ969W0 71 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 KIAA1549Q9HCM3 1950 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 A0A0U1RQV5 110 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 DCDC2BA2VCK2 349 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 OR6C6A6NF89 314 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 PLA2G10O15496 165 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 SLC2A1P11166 492 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 FCGR2AP12318 317 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 MNDAP41218 407 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 RFX2P48378 723 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 MMP15P51511 669 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 BCAP31P51572 246 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 GALK2Q01415 458 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 PLXDC2Q6UX71 529 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 DOK3Q7L591 496 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 ABHD12BQ7Z5M8 362 aaPredicted RBP11.32□□□□□ -0.6
SNX1-211ENST00000560829 MCEMP1Q8IX19 187 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 ZADH2Q8N4Q0 377 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 OR1J2Q8NGS2 313 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 TRIM63Q969Q1 353 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 FGGYQ96C11 551 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 FOXRED1Q96CU9 486 aaPredicted RBP11.32□□□□□ -0.6
SNX1-211ENST00000560829 HAVCR1Q96D42 359 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 CALHM2Q9HA72 323 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 GPR84Q9NQS5 396 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 PLSCR2Q9NRY7 297 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 TIMM10BQ9Y5J6 103 aa11.32□□□□□ -0.6
SNX1-211ENST00000560829 A6NIN4 97 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 M0R135 149 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 AQP7O14520 342 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 PFDN1O60925 122 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 KRT33AO76009 404 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 FARS2O95363 451 aaKnown RBP11.31□□□□□ -0.6
SNX1-211ENST00000560829 ADRB1P08588 477 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 SPNP16150 400 aa11.31□□□□□ -0.6
SNX1-211ENST00000560829 ZNF32P17041 273 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms