RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 COG8Q96MW5 612 aa9.07□□□□□ -0.96
TPM1-221ENST00000559831 DOK1Q99704 481 aa9.07□□□□□ -0.96
TPM1-221ENST00000559831 OR10A4Q9H209 315 aa9.07□□□□□ -0.96
TPM1-221ENST00000559831 NIPAL2Q9H841 368 aa9.07□□□□□ -0.96
TPM1-221ENST00000559831 CDH20Q9HBT6 801 aa9.07□□□□□ -0.96
TPM1-221ENST00000559831 SIRT4Q9Y6E7 314 aaPredicted RBP9.07□□□□□ -0.96
TPM1-221ENST00000559831 R4GMQ9 66 aa9.07□□□□□ -0.96
TPM1-221ENST00000559831 LOC100509620A0A075B734 347 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 TRBV2A0A0J9YWF9 115 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 TBX1O43435 398 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 PNPP00491 289 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 APOC1P02654 83 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 SERPINA5P05154 406 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ACSM4P0C7M7 580 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 COX5BP10606 129 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 PPP3CBP16298 524 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ZNF14P17017 642 aaPredicted RBP9.06□□□□□ -0.96
TPM1-221ENST00000559831 CELP19835 753 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 AGAP20933 346 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 LIPAP38571 399 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 KIR3DL2P43630 455 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ALDH3B2P48448 385 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 TGM4P49221 684 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 NANOS3P60323 173 aaKnown RBP9.06□□□□□ -0.96
TPM1-221ENST00000559831 SLC3A1Q07837 685 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ACSM1Q08AH1 577 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ALKBH1Q13686 389 aaKnown RBP9.06□□□□□ -0.96
TPM1-221ENST00000559831 BLMHQ13867 455 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 CDK5R1Q15078 307 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 WDR38Q5JTN6 314 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 BCL2L15Q5TBC7 163 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 RPL22L1Q6P5R6 122 aaKnown RBP9.06□□□□□ -0.96
TPM1-221ENST00000559831 FAM57BQ71RH2 274 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 RHOUQ7L0Q8 258 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 NAA40Q86UY6 237 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 CATSPERDQ86XM0 798 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 EGFL6Q8IUX8 553 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 PRSS35Q8N3Z0 413 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 OR1J2Q8NGS2 313 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 OR2G2Q8NGZ5 317 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 HAVCR2Q8TDQ0 301 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 PPP1R14AQ96A00 147 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 PGAM5Q96HS1 289 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ZNF75AQ96N20 296 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 WFIKKN1Q96NZ8 548 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
TPM1-221ENST00000559831 MED18Q9BUE0 208 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ISYNA1Q9NPH2 558 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 FAM206AQ9NX38 181 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 NPAP1Q9NZP6 1156 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ATPIF1Q9UII2 106 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ST6GALNAC2Q9UJ37 374 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 OR52A1Q9UKL2 312 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 SLC22A13Q9Y226 551 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 KALRNO60229 2985 aa9.06□□□□□ -0.96
TPM1-221ENST00000559831 ZNF462Q96JM2 2506 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 CFAP46Q8IYW2 2715 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 H3BSH0 61 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 OGG1O15527 345 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 SRSF10O75494 262 aaKnown RBP9.05□□□□□ -0.96
TPM1-221ENST00000559831 IGKV3-15P01624 115 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 LCATP04180 440 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 THBDP07204 575 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 CECR9P0C854 216 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 CPEP16870 476 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 DCTDP32321 178 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 RPS25P62851 125 aaKnown RBP9.05□□□□□ -0.96
TPM1-221ENST00000559831 BDH1Q02338 343 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 HGFACQ04756 655 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 RSPO1Q2MKA7 263 aaPredicted RBP9.05□□□□□ -0.96
TPM1-221ENST00000559831 GFOD2Q3B7J2 385 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 KRTAP27-1Q3LI81 207 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 CCDC58Q4VC31 144 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 DRAM2Q6UX65 266 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 C22orf34Q6ZV56 151 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 SATL1Q86VE3 508 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 COMMD2Q86X83 199 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 PAQR4Q8N4S7 273 aaPredicted RBP9.05□□□□□ -0.96
TPM1-221ENST00000559831 ZNF676Q8N7Q3 588 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 LINC01560Q8TB33 94 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 RNF166Q96A37 237 aaPredicted RBP9.05□□□□□ -0.96
TPM1-221ENST00000559831 POM121L2Q96KW2 1035 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 C4orf45Q96LM5 186 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 DCLRE1CQ96SD1 692 aaKnown RBP9.05□□□□□ -0.96
TPM1-221ENST00000559831 PDCD1LG2Q9BQ51 273 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 TMED9Q9BVK6 235 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 PBOV1Q9GZY1 135 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 COMMD4Q9H0A8 199 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 OR51B6Q9H340 312 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 MOB1AQ9H8S9 216 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 G6PC2Q9NQR9 355 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 FRRS1LQ9P0K9 344 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 CRNNQ9UBG3 495 aaPredicted RBP9.05□□□□□ -0.96
TPM1-221ENST00000559831 NDRG3Q9UGV2 375 aa9.05□□□□□ -0.96
TPM1-221ENST00000559831 SPTBN1Q01082 2364 aaKnown RBP9.05□□□□□ -0.96
TPM1-221ENST00000559831 C5orf63A6NC05 138 aa9.04□□□□□ -0.96
TPM1-221ENST00000559831 OR4C45A6NMZ5 311 aa9.04□□□□□ -0.96
TPM1-221ENST00000559831 P2RY10O00398 339 aa9.04□□□□□ -0.96
TPM1-221ENST00000559831 CCRL2O00421 344 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms