RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LRP12Q9Y561 859 aa5.72□□□□□ -1.49
CHRNA3-204ENST00000559002 N6AMT1Q9Y5N5 214 aa5.72□□□□□ -1.49
CHRNA3-204ENST00000559002 SNX5Q9Y5X3 404 aa5.72□□□□□ -1.49
CHRNA3-204ENST00000559002 TACC2O95359 2948 aa5.72□□□□□ -1.49
CHRNA3-204ENST00000559002 TMEM269A0A1B0GVZ9 245 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 A6NNC1 897 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 DEFB108AA8MXU0 73 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 PRR32B1ATL7 298 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 J3QLW9 94 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 J3QW42 95 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 MAGEB4O15481 346 aaPredicted RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 TBX1O43435 398 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 RPP14O95059 124 aaKnown RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 MT-ND2P03891 347 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 MT-ND5P03915 603 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 LCATP04180 440 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 LCKP06239 509 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 HTR1AP08908 422 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ADRA2AP08913 450 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ACSM4P0C7M7 580 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 FAM157BP0CG42 384 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 LIMS3P0CW19 117 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 LIMS4P0CW20 117 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF19P17023 458 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 C21orf33P30042 268 aaPredicted RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 CALCRP30988 508 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 DCTDP32321 178 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 RAD52P43351 418 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ETV1P50549 477 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 GBX2P52951 348 aaPredicted RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 PSMA6P60900 246 aaKnown RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 RPS23P62266 143 aaKnown RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 SPOCK1Q08629 439 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 MALLQ13021 153 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 MRPL28Q13084 256 aaKnown RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 SNTB2Q13425 540 aaKnown RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 DAZAP2Q15038 168 aaPredicted RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 KCTD21Q4G0X4 260 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 CDONQ4KMG0 1287 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ADAM5Q6NVV9 412 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 DRAM2Q6UX65 266 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 FAM57BQ71RH2 274 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 PRSS48Q7RTY5 328 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 KCTD20Q7Z5Y7 419 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 SYS1Q8N2H4 156 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 PAQR4Q8N4S7 273 aaPredicted RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 SVOPQ8N4V2 548 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ACBD4Q8NC06 268 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 KBTBD8Q8NFY9 601 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 OR5L1Q8NGL2 311 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ABHD4Q8TB40 342 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 HAVCR2Q8TDQ0 301 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 SGCDQ92629 289 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 APOBEC3DQ96AK3 386 aaPredicted RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 PGAM5Q96HS1 289 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 C4orf36Q96KX1 117 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 C4orf45Q96LM5 186 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 COG8Q96MW5 612 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 PSMG3-AS1Q96PY0 264 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 DOK1Q99704 481 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 MND1Q9BWT6 205 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 BCL2L14Q9BZR8 327 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 DUSP21Q9H596 190 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 MOB1AQ9H8S9 216 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 BRD7Q9NPI1 651 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ACOXLQ9NUZ1 547 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 PAK1IP1Q9NWT1 392 aaPredicted RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ERVK-18Q9QC07 812 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 MRM2Q9UI43 246 aaKnown RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 CAB39Q9Y376 341 aaPredicted RBP5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 ATP23Q9Y6H3 246 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
CHRNA3-204ENST00000559002 FLNBO75369 2602 aaKnown RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 DCHS2Q6V1P9 2916 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 TMEM129A0AVI4 362 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 ACOD1A6NK06 481 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 VSTM5A8MXK1 200 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 LOC110117498-PIK3R3F6TDL0 507 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 SIAH2O43255 324 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 MRPS14O60783 128 aaKnown RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 SMPD2O60906 423 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 SLC2A1P11166 492 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF35P13682 527 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 NR4A1P22736 598 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 COL8A1P27658 744 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 PCSK6P29122 969 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 GCH1P30793 250 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 OTX1P32242 354 aaPredicted RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 PSMB10P40306 273 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 WNT5AP41221 380 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 UCP2P55851 309 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 WNT4P56705 351 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 OR12D2P58182 307 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF121P58317 390 aaPredicted RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 PPP1CBP62140 327 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 MVKQ03426 396 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 GFOD2Q3B7J2 385 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 KRTAP27-1Q3LI81 207 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 BCL2L15Q5TBC7 163 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 OR2G6Q5TZ20 316 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms