RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 RNH1P13489 461 aaKnown RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 FUT1P19526 365 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 CSNK2A2P19784 350 aaPredicted RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 NAA10P41227 235 aaPredicted RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 ARRB1P49407 418 aaPredicted RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 NUBP1P53384 320 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 PPP1R1AQ13522 171 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 HNF4GQ14541 408 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 OR1Q1Q15612 314 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 TMEM35AQ53FP2 167 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 AKIRIN2Q53H80 203 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 PRSS54Q6PEW0 395 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 WDR88Q6ZMY6 472 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 DCXRQ7Z4W1 244 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 ZNF595Q8IYB9 648 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 C19orf47Q8N9M1 422 aaKnown RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 ZSCAN4Q8NAM6 433 aaPredicted RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 BEND2Q8NDZ0 799 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 OR2L8Q8NGY9 312 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 GPR148Q8TDV2 347 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 LMX1AQ8TE12 382 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 SLC37A2Q8TED4 501 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 MAFIPQ8WZ33 124 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 ISOC2Q96AB3 205 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 MRPL37Q9BZE1 423 aaKnown RBP9.78□□□□□ -0.84
USP3-206ENST00000558157 CHRNA9Q9UGM1 479 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 TMEM131Q92545 1883 aa9.78□□□□□ -0.84
USP3-206ENST00000558157 HSPB2A8KAH6 182 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 C9JQL5 133 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 ZIC2O95409 532 aaPredicted RBP9.77□□□□□ -0.84
USP3-206ENST00000558157 COX5BP10606 129 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 PEBP1P30086 187 aaKnown RBP9.77□□□□□ -0.84
USP3-206ENST00000558157 PDX1P52945 283 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 UCP2P55851 309 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 TAS2R31P59538 309 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 NUTF2P61970 127 aaKnown RBP9.77□□□□□ -0.84
USP3-206ENST00000558157 RSU1Q15404 277 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 RAB11BQ15907 218 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 HSPB2Q16082 182 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 PHF19Q5T6S3 580 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 UBE3DQ7Z6J8 389 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 ARL14Q8N4G2 192 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 OR52E2Q8NGJ4 325 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 ADAMTS15Q8TE58 950 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 NOL4LQ96MY1 436 aaPredicted RBP9.77□□□□□ -0.84
USP3-206ENST00000558157 YPEL4Q96NS1 127 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 ZNF350Q9GZX5 532 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 UBQLN4Q9NRR5 601 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 VSIG4Q9Y279 399 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 WDR45Q9Y484 360 aa9.77□□□□□ -0.84
USP3-206ENST00000558157 C5orf51A6NDU8 294 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 SLC17A2O00624 439 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 FCMRO60667 390 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 CLEC3AO75596 197 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 S1PR1P21453 382 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 HTR2CP28335 458 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 AKR1C3P42330 323 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 SSR2P43308 183 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 ADAM8P78325 824 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 NHLH2Q02577 135 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 PLA2G7Q13093 441 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 GPR18Q14330 331 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 SLC9A5Q14940 896 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 CEBPEQ15744 281 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 ISXQ2M1V0 245 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 ARHGAP11BQ3KRB8 267 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 DPPA2Q7Z7J5 298 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 ACBD4Q8NC06 268 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 OR51D1Q8NGF3 324 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 OR9A4Q8NGU2 314 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 OR13D1Q8NGV5 346 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 SECTM1Q8WVN6 248 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 RNF166Q96A37 237 aaPredicted RBP9.77□□□□□ -0.85
USP3-206ENST00000558157 GALNT14Q96FL9 552 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 IP6K3Q96PC2 410 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 STACQ99469 402 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 NRSN2Q9GZP1 204 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 TAF9BQ9HBM6 251 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 TMEM74BQ9NUR3 256 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 PISDQ9UG56 409 aa9.77□□□□□ -0.85
USP3-206ENST00000558157 TRAV27A0A087WT01 109 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 KIR2DS5A0A0G2JLQ3 304 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 A0A0G2JNG1 304 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 MEIS3P1A6NDR6 274 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 TMEM212A6NML5 194 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 EEF1E1-BLOC1S5C9J1V9 151 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 ZNF587BE7ETH6 402 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 KIR2DS3K7RE56 304 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 LRP3O75074 770 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 CRYABP02511 175 aaKnown RBP9.76□□□□□ -0.85
USP3-206ENST00000558157 EFNB2P52799 333 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 HNRNPKP61978 463 aaKnown RBP eCLIP9.76□□□□□ -0.85
USP3-206ENST00000558157 KIR2DS5Q14953 304 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 ARHGAP40Q5TG30 622 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 PAPD4Q6PIY7 484 aaKnown RBP9.76□□□□□ -0.85
USP3-206ENST00000558157 GKN2Q86XP6 184 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 OR5T3Q8NGG3 340 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 OR10D4PQ8NGN7 298 aa9.76□□□□□ -0.85
USP3-206ENST00000558157 OR51A7Q8NH64 312 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms