RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 MEF2DQ14814 521 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 C1orf140Q5VVS0 124 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 PTCRAQ6ISU1 281 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 TTLL10Q6ZVT0 673 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 BHLHE23Q8NDY6 225 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 OR5T2Q8NGG2 359 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 MARCH1Q8TCQ1 289 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 SLC46A1Q96NT5 459 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 TBL1XR1Q9BZK7 514 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 CHMP1AQ9HD42 196 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 VSX1Q9NZR4 365 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 ATXN7L1Q9ULK2 861 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 ATG2AQ2TAZ0 1938 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 THADAQ6YHU6 1953 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 IGHV5-51A0A0C4DH38 117 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 PLPP3O14495 311 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 SEMA4FO95754 770 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 ZNF823P16415 610 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 RABIFP47224 123 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 SLC6A8P48029 635 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 EFNA3P52797 238 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 C1orf100Q5SVJ3 147 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 OR4K17Q8NGC6 315 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 ELP5Q8TE02 316 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 TMED6Q8WW62 240 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 RRNAD1Q96FB5 475 aaKnown RBP10.17□□□□□ -0.78
SRP54-213ENST00000556994 PIK3IP1Q96FE7 263 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 TCTN2Q96GX1 697 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 TGM7Q96PF1 710 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 FOXQ1Q9C009 403 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 TLNRD1Q9H1K6 362 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 FBRSQ9HAH7 460 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 LANCL2Q9NS86 450 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 FBXO9Q9UK97 447 aaPredicted RBP10.17□□□□□ -0.78
SRP54-213ENST00000556994 SLC5A6Q9Y289 635 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 KCNK7Q9Y2U2 307 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 RHBDD3Q9Y3P4 386 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 SPTY2D1-AS1A0A0U1RR47 76 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 MEGF11A6BM72 1044 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 FRG2CA6NGY1 282 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 DXOO77932 396 aaKnown RBP10.17□□□□□ -0.78
SRP54-213ENST00000556994 IL2RAP01589 272 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 IFNA6P05013 189 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 IGHV4-34P06331 123 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 PI3P19957 117 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 PSMB6P28072 239 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 SCRN3Q0VDG4 424 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 HFEQ30201 348 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 DMRTC1Q5HYR2 192 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 TMEM200AQ86VY9 491 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 LYPD6Q86Y78 171 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 C9orf40Q8IXQ3 194 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 ARMC10Q8N2F6 343 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 SVBPQ8N300 66 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 ZNF721Q8TF20 911 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 ADAT3Q96EY9 351 aaPredicted RBP10.17□□□□□ -0.78
SRP54-213ENST00000556994 NICN1Q9BSH3 213 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 DHCR7Q9UBM7 475 aaKnown RBP10.17□□□□□ -0.78
SRP54-213ENST00000556994 RAB22AQ9UL26 194 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 MKL2Q9ULH7 1088 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 HS3ST3A1Q9Y663 406 aa10.17□□□□□ -0.78
SRP54-213ENST00000556994 RAB19A4D1S5 217 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 BLACEA4D250 179 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 DDAH2O95865 285 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 CRHP06850 196 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 VSIG8P0DPA2 414 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 CD37P11049 281 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 HLA-GP17693 338 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 GABRG2P18507 467 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 PGCP20142 388 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 FOXL2P58012 376 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 PLCXD2Q0VAA5 305 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 CCDC157Q569K6 752 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 ZNF813Q6ZN06 617 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 COX15Q7KZN9 410 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 NUP54Q7Z3B4 507 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.16□□□□□ -0.78
SRP54-213ENST00000556994 ST7LQ8TDW4 575 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 CPNE2Q96FN4 548 aaPredicted RBP10.16□□□□□ -0.78
SRP54-213ENST00000556994 RNF126Q9BV68 326 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 TREM1Q9NP99 234 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 MED29Q9NX70 200 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 SLC2A8Q9NY64 477 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 ZNF629Q9UEG4 869 aaPredicted RBP10.16□□□□□ -0.78
SRP54-213ENST00000556994 TMEM131Q92545 1883 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 WDFY3Q8IZQ1 3526 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 A0A0A6YYH2 397 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 LOC390937A0A1W2PQ73 354 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 A6NJ64 397 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 ZNF98A6NK75 572 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 H0YIZ8 118 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 FGF16O43320 207 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 SSX5O60225 188 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 ADAP1O75689 374 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 MT-ATP6P00846 226 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 IGKV3-11P04433 115 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 PVALBP20472 110 aaPredicted RBP10.16□□□□□ -0.78
SRP54-213ENST00000556994 AIMP2Q13155 320 aaKnown RBP10.16□□□□□ -0.78
SRP54-213ENST00000556994 SMAD2Q15796 467 aaKnown RBP10.16□□□□□ -0.78
SRP54-213ENST00000556994 NKAPLQ5M9Q1 402 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms