RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 PRPF19Q9UMS4 504 aaKnown RBP4.05□□□□□ -1.76
ATXN3-243ENST00000556671 LAMP3Q9UQV4 416 aa4.05□□□□□ -1.76
ATXN3-243ENST00000556671 AMDHD2Q9Y303 409 aa4.05□□□□□ -1.76
ATXN3-243ENST00000556671 RNF115Q9Y4L5 304 aa4.05□□□□□ -1.76
ATXN3-243ENST00000556671 IER3IP1Q9Y5U9 82 aa4.05□□□□□ -1.76
ATXN3-243ENST00000556671 U3KQV3 271 aa4.05□□□□□ -1.76
ATXN3-243ENST00000556671 PLCE1Q9P212 2302 aa4.05□□□□□ -1.76
ATXN3-243ENST00000556671 SPENQ96T58 3664 aaKnown RBP4.05□□□□□ -1.76
ATXN3-243ENST00000556671 DCHS2Q6V1P9 2916 aa4.05□□□□□ -1.76
ATXN3-243ENST00000556671 ASH1LQ9NR48 2969 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 TRBV4-1A0A0J9YWV2 114 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 DEFB108AA8MXU0 73 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 H7C1C5 153 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 SMPD2O60906 423 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 E2F6O75461 281 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 TRMUO75648 421 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CIB2O75838 187 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CCNB2O95067 398 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 FARS2O95363 451 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CST1P01037 141 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 IGHG1P01857 330 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 HLA-HP01893 362 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CRYAAP02489 173 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 RAF1P04049 648 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ASAH2BP0C7U1 165 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 B4GALT1P15291 398 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 POU1F1P28069 291 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CDAP32320 146 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 IFNGR2P38484 337 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 DAP3P51398 398 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 IDH3GP51553 393 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 P2RY4P51582 365 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 NR1H2P55055 460 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 RPL27P61353 136 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 LCN6P62502 163 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ZP4Q12836 540 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 TRAP1Q12931 704 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 FLOT2Q14254 428 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ACKR1Q16570 336 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 TBRG1Q3YBR2 411 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 NCMAPQ5T1S8 102 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 TMEM53Q6P2H8 277 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 SMARCD3Q6STE5 483 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 LINGO2Q7L985 606 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 SLC46A3Q7Z3Q1 461 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 C20orf196Q8IYI0 205 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 OFCC1Q8IZS5 231 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 FBXL14Q8N1E6 418 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ARHGAP24Q8N264 748 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 WDR31Q8NA23 367 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ICA1LQ8NDH6 482 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 KBTBD8Q8NFY9 601 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 OR4K5Q8NGD3 323 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 OR6X1Q8NH79 312 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 SLC7A13Q8TCU3 470 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 BCL2L2Q92843 193 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 MCHR2Q969V1 340 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 FBXO17Q96EF6 278 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 PERPQ96FX8 193 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 SLC25A44Q96H78 314 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 C7orf34Q96L11 122 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 SAMD8Q96LT4 415 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ADAD1Q96M93 576 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 MUS81Q96NY9 551 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ERMAPQ96PL5 475 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CCL19Q99731 98 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 SH3GL3Q99963 347 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 KATNB1Q9BVA0 655 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ELOVL1Q9BW60 279 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CADM1Q9BY67 442 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 LINC00470Q9BZP3 86 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 RBM38Q9H0Z9 239 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 C1orf21Q9H246 121 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 OR51B6Q9H340 312 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 TXNIPQ9H3M7 391 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 DENND2DQ9H6A0 471 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 YY1AP1Q9H869 796 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 REEP1Q9H902 201 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CCNB1IP1Q9NPC3 277 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 IL1RAPQ9NPH3 570 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 GLTPQ9NZD2 209 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 B3GAT1Q9P2W7 334 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 MOKQ9UQ07 419 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 TMEM5Q9Y2B1 443 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 SAMHD1Q9Y3Z3 626 aaKnown RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 APCP25054 2843 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 CR1P17927 2039 aa4.04□□□□□ -1.76
ATXN3-243ENST00000556671 HRNRQ86YZ3 2850 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-243ENST00000556671 ANKHD1Q8IWZ3 2542 aaKnown RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 UNC79Q9P2D8 2635 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 LOC102725191A0A1B0GVB3 256 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 IQCMA0A1B0GVH7 501 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 HTR3EA5X5Y0 456 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 FAM90A18PA6NE21 464 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 FAM90A16PA6NEW6 464 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 A6NIZ1 184 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 FAM90A9PA6NNJ1 464 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 FAM90A5PA8MXJ8 464 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 ZNF99A8MXY4 864 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms