RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 MRPL53Q96EL3 112 aaKnown RBP3.16□□□□□ -1.9
ATXN3-234ENST00000555958 SMIM10Q96HG1 83 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 RILPQ96NA2 401 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 EBNA1BP2Q99848 306 aaKnown RBP3.16□□□□□ -1.9
ATXN3-234ENST00000555958 SFXN3Q9BWM7 321 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 MMADHCQ9H3L0 296 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-234ENST00000555958 LRRC40Q9H9A6 602 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 CALHM2Q9HA72 323 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 RNPEPL1Q9HAU8 725 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 FBXO6Q9NRD1 293 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-234ENST00000555958 UTP6Q9NYH9 597 aaKnown RBP3.16□□□□□ -1.9
ATXN3-234ENST00000555958 KLRF1Q9NZS2 232 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 CLCF1Q9UBD9 225 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 KLHL21Q9UJP4 597 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 BOKQ9UMX3 212 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-234ENST00000555958 DIMT1Q9UNQ2 313 aaKnown RBP3.16□□□□□ -1.9
ATXN3-234ENST00000555958 PDE10AQ9Y233 779 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 C15orf41Q9Y2V0 281 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 CLCA3PQ9Y6N3 262 aa3.16□□□□□ -1.9
ATXN3-234ENST00000555958 ALPK2Q86TB3 2170 aa3.15□□□□□ -1.9
ATXN3-234ENST00000555958 EXPH5Q8NEV8 1989 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 LRP5LA4QPB2 252 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 E5RI56 91 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 APOC4-APOC2K7ER74 178 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ERI3O43414 337 aaKnown RBP3.15□□□□□ -1.91
ATXN3-234ENST00000555958 TCF21O43680 179 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 TYROBPO43914 113 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 GMFGO60234 142 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 GOSR1O95249 250 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 GUCA1CO95843 209 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 APOC2P02655 101 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 OPN1LWP04000 364 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 GYPCP04921 128 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 HPNP05981 417 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 IL10P22301 178 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 PTPN6P29350 595 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 TTPAP49638 278 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 LHX2P50458 406 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 SUCLG1P53597 346 aaKnown RBP3.15□□□□□ -1.91
ATXN3-234ENST00000555958 DIO3P55073 304 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 LIM2P55344 173 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 HERVK_113P63132 956 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ERVK-8P63133 956 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ACTG1P63261 375 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 VLDLRP98155 873 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ACVR1Q04771 509 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 RGS1Q08116 209 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 STX4Q12846 297 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 GGTLC2Q14390 218 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ARHGAP19Q14CB8 494 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 HAGHQ16775 308 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ZNF674Q2M3X9 581 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 PARP6Q2NL67 630 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 PGGHGQ32M88 737 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 TCHHL1Q5QJ38 904 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-234ENST00000555958 CYB5R2Q6BCY4 276 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ANGPTL8Q6UXH0 198 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 CENPUQ71F23 418 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 P4HA3Q7Z4N8 544 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 C10orf53Q8N6V4 93 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 CEP112Q8N8E3 955 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 SPC24Q8NBT2 197 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 OR13F1Q8NGS4 319 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 NT5CQ8TCD5 201 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 MGARPQ8TDB4 240 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 EEF1AKMT1Q8WVE0 214 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 SNF8Q96H20 258 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 C9orf85Q96MD7 179 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 GPR21Q99679 349 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 FUNDC2Q9BWH2 189 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ERVK-6Q9BXR3 956 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 EHD1Q9H4M9 534 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 FOLH1BQ9HBA9 442 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 ADAP2Q9NPF8 381 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 FAM114A2Q9NRY5 505 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 RPS6KB2Q9UBS0 482 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 SLC9A8Q9Y2E8 581 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 RNF115Q9Y4L5 304 aa3.15□□□□□ -1.91
ATXN3-234ENST00000555958 BIRC6Q9NR09 4857 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 FREM1Q5H8C1 2179 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 A0A1W2PP18 115 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 PSTPIP1O43586 416 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 ZBTB14O43829 449 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 TGFAP01135 160 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CLPSP04118 112 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CPN1P15169 458 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 TBXA2RP21731 343 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 RPS3P23396 243 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATXN3-234ENST00000555958 IL2RGP31785 369 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 SAA4P35542 130 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 HSD17B2P37059 387 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 PTGDSP41222 190 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CASP3P42574 277 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 SLC6A8P48029 635 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CLDN18P56856 261 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 RAB38P57729 211 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 RELAQ04206 551 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 BSPH1Q075Z2 132 aa3.14□□□□□ -1.91
ATXN3-234ENST00000555958 LOXL1Q08397 574 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-234ENST00000555958 CDH17Q12864 832 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms