RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CHD3Q12873 2000 aaKnown RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PPP5D1E7EU14 171 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 NRASP01111 189 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 MBP02144 154 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 MRPS21P82921 87 aaKnown RBP6.3□□□□□ -1.4
SYNE2-216ENST00000555002 DRAM2Q6UX65 266 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 ZDHHC23Q8IYP9 409 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 OR2T11Q8NH01 316 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 FBXO27Q8NI29 283 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 DLL4Q9NR61 685 aa6.3□□□□□ -1.4
SYNE2-216ENST00000555002 PCNX1Q96RV3 2341 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SLC10A3P09131 477 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 GABRB3P28472 473 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 C21orf33P30042 268 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 VASH2Q86V25 355 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OPALINQ96PE5 141 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SLC5A6Q9Y289 635 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 GPR55Q9Y2T6 319 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 KPTNQ9Y664 436 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SLIT3O75094 1523 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1B0GWA3 101 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1B0GX78 115 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 NEURL1O76050 574 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 EXD3Q8N9H8 876 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 LFNGQ8NES3 379 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OR2Z1Q8NG97 314 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 CLDN24A6NM45 220 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 DUS4LO95620 317 aaKnown RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF85Q03923 595 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RTP5Q14D33 572 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ACSM6Q6P461 480 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SCGB1D4Q6XE38 83 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF620Q6ZNG0 422 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 GDF7Q7Z4P5 450 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RETREG3Q86VR2 466 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ANGPTL5Q86XS5 388 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 FBXL6Q8N531 539 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 CLDN22Q8N7P3 220 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 FAM174AQ8TBP5 190 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 PKMYT1Q99640 499 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 FLVCR1Q9Y5Y0 555 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ETV7Q9Y603 341 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 PKDREJQ9NTG1 2253 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 TRGV10A0A0A0MS01 117 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RAB5AP20339 215 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZXDAP98168 799 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF750Q32MQ0 723 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF628Q5EBL2 1059 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SYT6Q5T7P8 510 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 FDX2Q6P4F2 183 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 GRINAQ7Z429 371 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM255BQ8WV15 326 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 MUTYHQ9UIF7 546 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ANKRD31Q8N7Z5 1873 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 PHIPQ8WWQ0 1821 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 KCNAB3O43448 404 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SLC25A4P12235 298 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 AOAHP28039 575 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OPRM1P35372 400 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 NKX2-1P43699 371 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RGS7BPQ6MZT1 257 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OR13C8Q8NGS7 320 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF778Q96MU6 729 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OR5M11Q96RB7 305 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SEC22CQ9BRL7 303 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OR1A1Q9P1Q5 309 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 COA3Q9Y2R0 106 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 DCTN6O00399 190 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 MGPP08493 103 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 LYZP61626 148 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 HBA1P69905 142 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 REEP5Q00765 189 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 DPY19L2P2Q6ZN68 376 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ISCA2Q86U28 154 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OR5D13Q8NGL4 314 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SLCO4A1Q96BD0 722 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 MKRN2Q9H000 416 aaKnown RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 IGKV3-7A0A075B6H7 116 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 KIR2DS1A0A191URI9 304 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 DEFB108AA8MXU0 73 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SDCBPO00560 298 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 KIR2DS4P43632 304 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 PRLHRP49683 370 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 KIR2DS1Q14954 304 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF239Q16600 458 aaKnown RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 LAIR1Q6GTX8 287 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 AMIGO3Q86WK7 504 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 GPR26Q8NDV2 337 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 CA5BP1Q8WTZ4 195 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF480Q8WV37 535 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 GRAMD2BQ96HH9 432 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF696Q9H7X3 374 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 TRAV34A0A0B4J273 112 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RFPL4AA6NLU0 287 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SERPINE3A8MV23 424 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RFPL4AL1F8VTS6 287 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ADRA1AP35348 466 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RNFT1Q5M7Z0 435 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SFXN4Q6P4A7 337 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms