RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 RNASE6Q93091 150 aaKnown RBP9.84□□□□□ -0.83
SHMT2-216ENST00000554975 DDIT4LQ96D03 193 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 NEDD4LQ96PU5 975 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 DERL3Q96Q80 235 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 OR14A2Q96R54 314 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 FAM173AQ9BQD7 235 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 ACTR6Q9GZN1 396 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 NIPAL2Q9H841 368 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 ALKBH4Q9NXW9 302 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 VSX1Q9NZR4 365 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-216ENST00000554975 SPRR3Q9UBC9 169 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 COPS3Q9UNS2 423 aa9.84□□□□□ -0.83
SHMT2-216ENST00000554975 MED12LQ86YW9 2145 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 A0A1B0GVC2 190 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 LINC00854A0A1B0GVQ3 168 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 TMEM72A0PK05 275 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 PRSS37A4D1T9 235 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 OR14I1A6ND48 311 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ANXA2P2A6NMY6 339 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 INMT-MINDY4F8WBC2 141 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 TP53I11O14683 189 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF208O43345 1280 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ABHD16AO95870 558 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 HRGP04196 525 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ANXA2P07355 339 aaKnown RBP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 GSTT2BP0CG30 244 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 NR2C1P13056 603 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 BMP5P22003 454 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 FKBP2P26885 142 aaKnown RBP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ERP29P30040 261 aaKnown RBP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 SLC6A1P30531 599 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ASCL1P50553 236 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 CCR9P51686 369 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 OR10A3P58181 314 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 RPS11P62280 158 aaKnown RBP eCLIP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 GLO1Q04760 184 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ZP4Q12836 540 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 FBXL19-AS1Q494R0 122 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 APOOLQ6UXV4 268 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 MARCH3Q86UD3 253 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 NR2C2APQ86WQ0 139 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 DND1Q8IYX4 353 aaKnown RBP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 TOMM5Q8N4H5 51 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 RFLNBQ8N5W9 214 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF676Q8N7Q3 588 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ADPRHL1Q8NDY3 354 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 OR10G3Q8NGC4 313 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 OR51L1Q8NGJ5 315 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 OTOSQ8NHW6 89 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF519Q8TB69 540 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 LGALS14Q8TCE9 139 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 GPR119Q8TDV5 335 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 UBASH3BQ8TF42 649 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 NSMAFQ92636 917 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 AKAP1Q92667 903 aaKnown RBP eCLIP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 KTI12Q96EK9 354 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 JSRP1Q96MG2 331 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 THAP7Q9BT49 309 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ABCG5Q9H222 651 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 MMP28Q9H239 520 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 EXO5Q9H790 373 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 NOX4Q9NPH5 578 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 V9GY05 133 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 ANK2Q01484 3957 aa9.83□□□□□ -0.84
SHMT2-216ENST00000554975 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 IFITM5A6NNB3 132 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 AQP7O14520 342 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 GPR171O14626 319 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 PRAF2O60831 178 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 WDR1O75083 606 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 CRLF1O75462 422 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 F13BP05160 661 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 CD2P06729 351 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 FBXO45P0C2W1 286 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 FAM157BP0CG42 384 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 OR8G3PP0DMU2 310 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 ARSBP15848 533 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 ATF1P18846 271 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 SRMP19623 302 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 ALOX5APP20292 161 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 AHCYP23526 432 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 GRPRP30550 384 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 FAUP35544 74 aaKnown RBP9.82□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF41P51814 821 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-216ENST00000554975 FBXW4P57775 412 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 RRAS2P62070 204 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-216ENST00000554975 CD300CQ08708 224 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 MAB21L1Q13394 359 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 TOMM20Q15388 145 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 TOMM34Q15785 309 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-216ENST00000554975 NTRK2Q16620 822 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 CEP78Q5JTW2 689 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 FAM27D1Q5T7N8 215 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 LIPNQ5VXI9 398 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 LYPD8Q6UX82 237 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 FAM109AQ8N4B1 249 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 MFSD8Q8NHS3 518 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 ZPLD1Q8TCW7 415 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 PAQR8Q8TEZ7 354 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 SLC25A43Q8WUT9 341 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms