RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 WSB2Q9NYS7 404 aaPredicted RBP14.07□□□□□ -0.16
SYNE3-203ENST00000554873 PRODH2Q9UF12 536 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 FARSAQ9Y285 508 aaKnown RBP14.07□□□□□ -0.16
SYNE3-203ENST00000554873 MED31Q9Y3C7 131 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 GOLT1BQ9Y3E0 138 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 PTPRSQ13332 1948 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 CCDC187A0A096LP49 1063 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 TSPAN15O95858 294 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 DBIP07108 87 aaKnown RBP14.07□□□□□ -0.16
SYNE3-203ENST00000554873 OR8G3PP0DMU2 310 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 RAB6AP20340 208 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 WASP42768 502 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 RUNX2Q13950 521 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 GUK1Q16774 197 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 SHISA5Q8N114 240 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 MUCL1Q96DR8 90 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 TNFRSF13CQ96RJ3 184 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 SLCO5A1Q9H2Y9 848 aa14.07□□□□□ -0.16
SYNE3-203ENST00000554873 ZNF107Q9UII5 783 aaPredicted RBP14.07□□□□□ -0.16
SYNE3-203ENST00000554873 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.06□□□□□ -0.16
SYNE3-203ENST00000554873 PRR19A6NJB7 356 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 HNRNPA1P09651 372 aaKnown RBP eCLIP14.06□□□□□ -0.16
SYNE3-203ENST00000554873 LYL1P12980 280 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 SNCAP37840 140 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 SKP1P63208 163 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 SSPNQ14714 243 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 TOMM34Q15785 309 aaPredicted RBP14.06□□□□□ -0.16
SYNE3-203ENST00000554873 UBE2V2Q15819 145 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 DCST2Q5T1A1 773 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 THEM4Q5T1C6 240 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 ARHGAP40Q5TG30 622 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 ARHGAP11AQ6P4F7 1023 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 PRSS54Q6PEW0 395 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 RTL10Q7L3V2 364 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 GPR137CQ8N3F9 429 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 CD300LFQ8TDQ1 290 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 PACRGQ96M98 296 aaPredicted RBP14.06□□□□□ -0.16
SYNE3-203ENST00000554873 CRLF2Q9HC73 371 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 SLC17A5Q9NRA2 495 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 CUTCQ9NTM9 273 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 SMCO3A2RU48 225 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 TAAR5O14804 337 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 DUS4LO95620 317 aaKnown RBP14.06□□□□□ -0.16
SYNE3-203ENST00000554873 CD200P41217 278 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 AKR1C8PQ5T2L2 129 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 RPL7L1Q6DKI1 246 aaKnown RBP14.06□□□□□ -0.16
SYNE3-203ENST00000554873 TMPPEQ6ZT21 453 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.06□□□□□ -0.16
SYNE3-203ENST00000554873 ZDHHC22Q8N966 263 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 OR51L1Q8NGJ5 315 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 PRRT1Q99946 306 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 MSRAQ9UJ68 235 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 MMP24Q9Y5R2 645 aa14.06□□□□□ -0.16
SYNE3-203ENST00000554873 TRAV8-7A0A075B6U6 113 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-203ENST00000554873 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-203ENST00000554873 CCL5P13501 91 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 TACR3P29371 465 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 PLAURQ03405 335 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 DEFB134Q4QY38 66 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 ZCCHC10Q8TBK6 192 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 SPPL3Q8TCT6 385 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 GRHL3Q8TE85 626 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 WDR92Q96MX6 357 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 SCRT1Q9BWW7 348 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 SLC2A8Q9NY64 477 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 C19orf53Q9UNZ5 99 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-203ENST00000554873 TRBV5-5A0A0J9YX44 114 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 GPANK1O95872 356 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 F13BP05160 661 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 CPMP14384 443 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 FAM78AQ5JUQ0 283 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 FBXO42Q6P3S6 717 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 C5orf24Q7Z6I8 188 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 ZNF664Q8N3J9 261 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 OR52E2Q8NGJ4 325 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 CERS4Q9HA82 394 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 KCNJ16Q9NPI9 418 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 THAP10Q9P2Z0 257 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-203ENST00000554873 A0A087WV48 116 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 A0A1W2PPC1 479 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 SPARCP09486 303 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 ZNF28P17035 718 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 RABIFP47224 123 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 DHPSP49366 369 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-203ENST00000554873 ADAM8P78325 824 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 TCEA2Q15560 299 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 ODF4Q2M2E3 257 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 FHL5Q5TD97 284 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 OR5AK2Q8NH90 309 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 ZNF417Q8TAU3 575 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 GPR148Q8TDV2 347 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 STACQ99469 402 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 EIF5A2Q9GZV4 153 aaKnown RBP14.05□□□□□ -0.16
SYNE3-203ENST00000554873 PLA2G2EQ9NZK7 142 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 LAMP5Q9UJQ1 280 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 AMDHD2Q9Y303 409 aa14.05□□□□□ -0.16
SYNE3-203ENST00000554873 A0A1W2PP55 124 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 TMEM235A6NFC5 223 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 C9J4A7 227 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms