RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574		R4GN57	208 aa		4.17	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NCOA6	Q14686	2063 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	RIF1	Q5UIP0	2472 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TRAV36DV7	A0A075B6V5	113 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	IGLV3-32	A0A0A0MS00	114 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TMED7-TICAM2	A0A0A6YYA0	188 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LOC100506127	A0A0U1RQW1	187 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	C17orf51	A8MQB3	221 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	C12orf71	A8MTZ7	269 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574		A8MVM7	634 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	MS4A18	H0YCH9	400 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	BLOC1S5-TXNDC5	H3BN57	136 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	IMPA2	O14732	288 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	GPX5	O75715	221 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR2J2	O76002	312 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	STK17B	O94768	372 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TXNDC12	O95881	172 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	IGHE	P01854	428 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	BGLAP	P02818	100 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CD14	P08571	375 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SBK2	P0C263	348 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	COX6A1	P12074	109 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	HIST1H1C	P16403	213 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	BDKRB2	P30411	391 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	GABRA5	P31644	462 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TGFBR1	P36897	503 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CRYBB2	P43320	205 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ENTPD1	P49961	510 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	BMX	P51813	675 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ZP1	P60852	638 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ACTC1	P68032	377 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ACTA1	P68133	377 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LTB	Q06643	244 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SNTA1	Q13424	505 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	GPR50	Q13585	617 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SF3A2	Q15428	464 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ZNF791	Q3KP31	576 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	KLHL12	Q53G59	568 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SLC35D3	Q5M8T2	416 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR2G6	Q5TZ20	316 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LIPK	Q5VXJ0	399 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CD200R1L	Q6Q8B3	271 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TMPRSS11A	Q6ZMR5	421 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	FAM122B	Q7Z309	247 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NANOGNB	Q7Z5D8	188 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PIP4P1	Q86T03	277 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ADCK1	Q86TW2	530 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LHFPL3	Q86UP9	236 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ADGRG3	Q86Y34	549 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CROCCP3	Q8IVE0	287 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	C10orf53	Q8N6V4	93 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LRRC75A	Q8NAA5	344 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CYB561A3	Q8NBI2	242 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NEXN-AS1	Q8NBZ9	246 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NPEPL1	Q8NDH3	523 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR11G2	Q8NGC1	345 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR52E2	Q8NGJ4	325 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR51G2	Q8NGK0	314 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR6S1	Q8NH40	331 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR4K13	Q8NH42	304 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	M1AP	Q8TC57	530 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	S100Z	Q8WXG8	99 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	UFD1	Q92890	307 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	HIST1H2AC	Q93077	130 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	BORCS5	Q969J3	196 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TAAR8	Q969N4	342 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	RASL10B	Q96S79	203 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	COQ7	Q99807	217 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	KATNB1	Q9BVA0	655 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NMNAT2	Q9BZQ4	307 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PLGRKT	Q9HBL7	147 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ADGRL4	Q9HBW9	690 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	HMG20A	Q9NP66	347 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	PALMD	Q9NP74	551 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SDHAF3	Q9NRP4	125 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	COQ3	Q9NZJ6	369 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	IL17B	Q9UHF5	180 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SSR3	Q9UNL2	185 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TMED7	Q9Y3B3	224 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LOXL2	Q9Y4K0	774 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SPIN1	Q9Y657	262 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	DNAJC13	O75165	2243 aa		4.16	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	DMXL1	Q9Y485	3027 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	DAPL1	A0PJW8	107 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574		B4DXG7	233 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574		B8ZZF3	427 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CLDN25	C9JDP6	229 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ZNF670-ZNF695	F2Z2N8	137 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	SLC30A4	O14863	429 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	OR2T1	O43869	369 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NDUFS7	O75251	213 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	RBMXL2	O75526	392 aa	Known RBP	4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	NUDT3	O95989	172 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	LALBA	P00709	142 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	RAB40AL	P0C0E4	278 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	CLU	P10909	449 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	ARSB	P15848	533 aa		4.15	□□□□□ -1.74
PPP4R3A-204	ENST00000554574	GAL	P22466	123 aa		4.15	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms