RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PRAMEF20Q5VT98 475 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 AWAT2Q6E213 333 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 C5orf46Q6UWT4 87 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 PRSS42Q7Z5A4 293 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF101Q8IZC7 436 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 NFAM1Q8NET5 270 aaPredicted RBP13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 RNF133Q8WVZ7 376 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 DMRTA2Q96SC8 542 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 FAM206AQ9NX38 181 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 PLEKHA6Q9Y2H5 1048 aa13.96□□□□□ -0.18
ARHGEF40-203ENST00000554514 TMEM200CA6NKL6 621 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 ABOP16442 354 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 ANOS1P23352 680 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 CD34P28906 385 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 UNC119Q13432 240 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 RNASE10Q5GAN6 216 aaKnown RBP13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 LCN10Q6JVE6 187 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR10S1Q8NGN2 331 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR13C8Q8NGS7 320 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 SELENOIQ9C0D9 397 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 AKIRIN1Q9H9L7 192 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 KIF25Q9UIL4 384 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 VSIG4Q9Y279 399 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 HMSDA8MTL9 139 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 GDF9O60383 454 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF735P0CB33 412 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 SMAD4Q13485 552 aaKnown RBP13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 MFSD13AQ14CX5 517 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 LY6G6FQ5SQ64 297 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 RHOUQ7L0Q8 258 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF546Q86UE3 836 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR1M1Q8NGA1 313 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 FAM71F1Q96KD3 344 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 NUP50Q9UKX7 468 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 SRPK3Q9UPE1 567 aa13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 RPH3AQ9Y2J0 694 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-203ENST00000554514 TTLL8A6PVC2 850 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF814B7Z6K7 855 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 SULT1C2O00338 296 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 LDLRAD4O15165 306 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 RAMP1O60894 148 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 AQP8O94778 261 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ISG15P05161 165 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 DCNP07585 359 aaKnown RBP13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 VAMP1P23763 118 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZP4Q12836 540 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 IKZF1Q13422 519 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 FAM74A1Q5RGS3 127 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 PXDC1Q5TGL8 231 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 WDR74Q6RFH5 385 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF813Q6ZN06 617 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ABHD12BQ7Z5M8 362 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 UEVLDQ8IX04 471 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 PAQR4Q8N4S7 273 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 NICN1Q9BSH3 213 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 CRB3Q9BUF7 120 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 C1orf198Q9H425 327 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 IFT46Q9NQC8 304 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 B3GAT1Q9P2W7 334 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 SLC5A6Q9Y289 635 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 MRPS17Q9Y2R5 130 aaKnown RBP13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 TRAV14DV4A0A0A6YYC5 116 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 RLN2P04090 185 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 FOSL2P15408 326 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF20P17024 532 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 AKR1C4P17516 323 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 HRH1P35367 487 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 KCTD9Q7L273 389 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ANGPTL5Q86XS5 388 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 SCARB1Q8WTV0 552 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 SLC25A21Q9BQT8 299 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 UBE2ZQ9H832 354 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 SCPEP1Q9HB40 452 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ALKBH4Q9NXW9 302 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ASH2LQ9UBL3 628 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 TEX51A0A1B0GUA7 166 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 B8ZZF3 427 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 DISC1C4P0D8 188 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 H3BUI4 141 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 RAB27BO00194 218 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 PMP2P02689 132 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 VSIG8P0DPA2 414 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 NAGAP17050 411 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 CLDN6P56747 220 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 SSBP1Q04837 148 aaKnown RBP13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 C1orf100Q5SVJ3 147 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 NKAIN3Q8N8D7 197 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR2AJ1Q8NGZ0 328 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 ST8SIA4Q92187 359 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 MARVELD3Q96A59 401 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 CYB5R1Q9UHQ9 305 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 PFDN2Q9UHV9 154 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 RAB22AQ9UL26 194 aa13.94□□□□□ -0.18
ARHGEF40-203ENST00000554514 OR6C65A6NJZ3 312 aa13.93□□□□□ -0.18
ARHGEF40-203ENST00000554514 RER1O15258 196 aa13.93□□□□□ -0.18
ARHGEF40-203ENST00000554514 KCNAB3O43448 404 aa13.93□□□□□ -0.18
ARHGEF40-203ENST00000554514 LAP3P28838 519 aa13.93□□□□□ -0.18
ARHGEF40-203ENST00000554514 MMP16P51512 607 aa13.93□□□□□ -0.18
ARHGEF40-203ENST00000554514 ZNF660Q6AZW8 331 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms