RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 P4HTMQ9NXG6 502 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 ALKBH4Q9NXW9 302 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 PIPOXQ9P0Z9 390 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 FARSAQ9Y285 508 aaKnown RBP10.41□□□□□ -0.74
SHMT2-212ENST00000554467 NUBP2Q9Y5Y2 271 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 SESN1Q9Y6P5 492 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 MGAQ8IWI9 3026 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 MUC6Q6W4X9 2439 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 TRAV8-7A0A075B6U6 113 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 LOC101059948A0A1B0GTJ6 334 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 ARL6IP5O75915 188 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF883P0CG24 379 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 MSX1P28360 303 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 GLO1Q04760 184 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 DCXRQ7Z4W1 244 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 YRDCQ86U90 279 aaKnown RBP10.4□□□□□ -0.74
SHMT2-212ENST00000554467 CCDC36Q8IYA8 594 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 LGALS14Q8TCE9 139 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 FLVCR2Q9UPI3 526 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 SULT2B1O00204 365 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 SIX6O95475 246 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 MLF1P58340 268 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 OC90Q02509 493 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-212ENST00000554467 SCRN3Q0VDG4 424 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF704Q6ZNC4 412 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-212ENST00000554467 FADS6Q8N9I5 356 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 LRRC46Q96FV0 321 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 TAAR9Q96RI9 348 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 UCN2Q96RP3 112 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 KCNK17Q96T54 332 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 DPAGT1Q9H3H5 408 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 CA10Q9NS85 328 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 DKKL1Q9UK85 242 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 DNAJC13O75165 2243 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF407Q9C0G0 2248 aa10.4□□□□□ -0.74
SHMT2-212ENST00000554467 OR4C45A6NMZ5 311 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 MPTX1A8MV57 137 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 GATBO75879 557 aaKnown RBP10.4□□□□□ -0.75
SHMT2-212ENST00000554467 DAP3P51398 398 aaKnown RBP10.4□□□□□ -0.75
SHMT2-212ENST00000554467 SLC18B1Q6NT16 456 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 OR1J4Q8NGS1 313 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 TSEN15Q8WW01 171 aaKnown RBP10.4□□□□□ -0.75
SHMT2-212ENST00000554467 ACOT12Q8WYK0 555 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 TMEM106AQ96A25 262 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 ELMOD3Q96FG2 381 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 PURGQ9UJV8 347 aaKnown RBP10.4□□□□□ -0.75
SHMT2-212ENST00000554467 LHX6Q9UPM6 363 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 LRP12Q9Y561 859 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 GVINP1Q7Z2Y8 2422 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 AKAP13Q12802 2813 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 CEP250Q9BV73 2442 aa10.4□□□□□ -0.75
SHMT2-212ENST00000554467 IGLV3-32A0A0A0MS00 114 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 OR2M5A3KFT3 312 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 GAAP10253 952 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 DLSTP36957 453 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 SNTB2Q13425 540 aaKnown RBP10.39□□□□□ -0.75
SHMT2-212ENST00000554467 SLC17A1Q14916 467 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 HES3Q5TGS1 186 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 C5orf46Q6UWT4 87 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 TPRA1Q86W33 373 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 UEVLDQ8IX04 471 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 OR8B4Q96RC9 309 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 EMC9Q9Y3B6 208 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 NCKAP5O14513 1909 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF318Q5VUA4 2279 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 GPRIN2O60269 458 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 KDM4BO94953 1096 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 IGHMP01871 453 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 RFPL3SP0C7P2 107 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF823P16415 610 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 ADRA2CP18825 462 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 HLXQ14774 488 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-212ENST00000554467 HFEQ30201 348 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF454Q8N9F8 522 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 SLC26A10Q8NG04 563 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 ADAMTS14Q8WXS8 1223 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 TINAGL1Q9GZM7 467 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-212ENST00000554467 KCNK15Q9H427 330 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 B3GALT5Q9Y2C3 310 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 TMEM14AQ9Y6G1 99 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 ARID1AO14497 2285 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 TRAV1-2A0A0B4J238 106 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 ZIC3O60481 467 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 MT-CO3P00414 261 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 LIFP15018 202 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 CRABP1P29762 137 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 P2RY4P51582 365 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 CLRN1P58418 232 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 RPS15P62841 145 aaKnown RBP10.39□□□□□ -0.75
SHMT2-212ENST00000554467 PLA2G7Q13093 441 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 SLC25A53Q5H9E4 307 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 BEST3Q8N1M1 668 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 OR4D10Q8NGI6 311 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 INTS12Q96CB8 462 aaKnown RBP10.39□□□□□ -0.75
SHMT2-212ENST00000554467 C4orf45Q96LM5 186 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 POTEKPQ9BYX7 375 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 OR10A4Q9H209 315 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 TCF7L1Q9HCS4 588 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 IL17BQ9UHF5 180 aa10.39□□□□□ -0.75
SHMT2-212ENST00000554467 PCDHGA5Q9Y5G8 931 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms