RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 OR4K13Q8NH42 304 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 CNIH3Q8TBE1 160 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 UBASH3BQ8TF42 649 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 FOXN4Q96NZ1 517 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 NMNAT3Q96T66 252 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 NIPSNAP1Q9BPW8 284 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 COA3Q9Y2R0 106 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-211ENST00000554310 POLR1DQ9Y2S0 133 aa11.19□□□□□ -0.62
SHMT2-211ENST00000554310 YLPM1P49750 1951 aaKnown RBP11.19□□□□□ -0.62
SHMT2-211ENST00000554310 INAFM1C9JVW0 142 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 MT-ND5P03915 603 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 GSTM3P21266 225 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 DCKP27707 260 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 EPHA2P29317 976 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 GCH1P30793 250 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 SLC35A2P78381 396 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 MRPS11P82912 194 aaKnown RBP11.18□□□□□ -0.62
SHMT2-211ENST00000554310 GGTLC2Q14390 218 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 PCGF3Q3KNV8 242 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 ZNF718Q3SXZ3 478 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 XAF1Q6GPH4 301 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 VASH1Q7L8A9 365 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-211ENST00000554310 CLVS1Q8IUQ0 354 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-211ENST00000554310 ENTHD1Q8IYW4 607 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 NPEPL1Q8NDH3 523 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 BPIFB6Q8NFQ5 453 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 OR13F1Q8NGS4 319 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 ABHD4Q8TB40 342 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 IPCEF1Q8WWN9 437 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-211ENST00000554310 TSSK2Q96PF2 358 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 DGCR6LQ9BY27 220 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 BPESC1Q9GZL8 116 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 EGLN3Q9H6Z9 239 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 ELOVL3Q9HB03 270 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 HINT3Q9NQE9 182 aaKnown RBP11.18□□□□□ -0.62
SHMT2-211ENST00000554310 RPRD1BQ9NQG5 326 aaKnown RBP11.18□□□□□ -0.62
SHMT2-211ENST00000554310 PLCXD1Q9NUJ7 323 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 PLEK2Q9NYT0 353 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 IL20Q9NYY1 176 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 TAAR3PQ9P1P4 343 aa11.18□□□□□ -0.62
SHMT2-211ENST00000554310 CGGBP1Q9UFW8 167 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-211ENST00000554310 OR6C6A6NF89 314 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 C17orf100A8MU93 164 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 J3QW42 95 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 DCTN6O00399 190 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 BHLHE40O14503 412 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 WBP4O75554 376 aaKnown RBP11.17□□□□□ -0.62
SHMT2-211ENST00000554310 ABHD16AO95870 558 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 GASTP01350 101 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 IGHV3-13P01766 116 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 NAT2P11245 290 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 TUBG1P23258 451 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 FMO3P31513 532 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 CRISP1P54107 249 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 PPP1CBP62140 327 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.17□□□□□ -0.62
SHMT2-211ENST00000554310 NEDD8Q15843 81 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 CLEC12AQ5QGZ9 265 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 MBNL2Q5VZF2 373 aaKnown RBP11.17□□□□□ -0.62
SHMT2-211ENST00000554310 ZBTB46Q86UZ6 589 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 ERI1Q8IV48 349 aaKnown RBP11.17□□□□□ -0.62
SHMT2-211ENST00000554310 OR6V1Q8N148 313 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 SDR9C7Q8NEX9 313 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 SLC26A10Q8NG04 563 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 OR52E2Q8NGJ4 325 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 APH1BQ8WW43 257 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 MUL1Q969V5 352 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 ISOC1Q96CN7 298 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 MARS2Q96GW9 593 aaKnown RBP11.17□□□□□ -0.62
SHMT2-211ENST00000554310 C4orf45Q96LM5 186 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 COG8Q96MW5 612 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 PLA2G12AQ9BZM1 189 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 HDHD2Q9H0R4 259 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 TUBG2Q9NRH3 451 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 TBC1D23Q9NUY8 699 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 TBCCD1Q9NVR7 557 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 PAK1IP1Q9NWT1 392 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-211ENST00000554310 NKIRAS2Q9NYR9 191 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 B9D1Q9UPM9 204 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 BAIAP2Q9UQB8 552 aa11.17□□□□□ -0.62
SHMT2-211ENST00000554310 IGHV4-61A0A0C4DH41 118 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 PLSCR5A0PG75 271 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 OR6C68A6NDL8 312 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 ZAR1LA6NP61 321 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 XPNPEP2O43895 674 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 MPZL2O60487 215 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 FAM20BO75063 409 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 MPZL1O95297 269 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 HPXP02790 462 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 OSMP13725 252 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 PCMT1P22061 227 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 ACHEP22303 614 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 CENPAP49450 140 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 GZMKP49863 264 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 MVKQ03426 396 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 COX10Q12887 443 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 RIN1Q13671 783 aa11.16□□□□□ -0.62
SHMT2-211ENST00000554310 ZMAT1Q5H9K5 638 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms