RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 MELKQ14680 651 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 MAD2L1BPQ15013 274 aaPredicted RBP14.26□□□□□ -0.13
NEK9-204ENST00000554258 PTGES3Q15185 160 aaKnown RBP14.26□□□□□ -0.13
NEK9-204ENST00000554258 MESTQ5EB52 335 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 CLEC12AQ5QGZ9 265 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 SLC27A4Q6P1M0 643 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 FIP1L1Q6UN15 594 aaKnown RBP14.26□□□□□ -0.13
NEK9-204ENST00000554258 ABHD12BQ7Z5M8 362 aaPredicted RBP14.26□□□□□ -0.13
NEK9-204ENST00000554258 FAM169BQ8N8A8 192 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 POMGNT2Q8NAT1 580 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 TEX47Q8TBZ9 253 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 HDAC2Q92769 488 aaKnown RBP14.26□□□□□ -0.13
NEK9-204ENST00000554258 ERMAPQ96PL5 475 aaPredicted RBP14.26□□□□□ -0.13
NEK9-204ENST00000554258 SYT3Q9BQG1 590 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 ALG12Q9BV10 488 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 FN3KRPQ9HA64 309 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 TBC1D23Q9NUY8 699 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 GRHPRQ9UBQ7 328 aa14.26□□□□□ -0.13
NEK9-204ENST00000554258 PPIAL4EA0A075B759 164 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 PPIAL4CA0A0B4J2A2 164 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 PPIAL4DF5H284 164 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 H0YJX3 145 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 UPK3AO75631 287 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 KRT33AO76009 404 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 CLPXO76031 633 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 IGKV3-15P01624 115 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 IGHG1P01857 330 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 HMGN1P05114 100 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 PPIAL4FP0DN26 164 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 POU1F1P28069 291 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 CDKN2AP42771 156 aaKnown RBP14.25□□□□□ -0.13
NEK9-204ENST00000554258 EFNB1P98172 346 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 CAMK2DQ13557 499 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 PHYHD1Q5SRE7 291 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 SLX4IPQ5VYV7 408 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 LRFN4Q6PJG9 635 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 ADCK1Q86TW2 530 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 JAZF1Q86VZ6 243 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 NPEPL1Q8NDH3 523 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 SGCDQ92629 289 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 ZNF566Q969W8 418 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 ZNF570Q96NI8 536 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 NOX3Q9HBY0 568 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 GLTPQ9NZD2 209 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 VSX1Q9NZR4 365 aaPredicted RBP14.25□□□□□ -0.13
NEK9-204ENST00000554258 PURGQ9UJV8 347 aaKnown RBP14.25□□□□□ -0.13
NEK9-204ENST00000554258 ORC6Q9Y5N6 252 aa14.25□□□□□ -0.13
NEK9-204ENST00000554258 SOX21Q9Y651 276 aaPredicted RBP14.25□□□□□ -0.13
NEK9-204ENST00000554258 DOCK11Q5JSL3 2073 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 TEX13CA0A0J9YWL9 993 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 SLC22A23A1A5C7 686 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 PRSS37A4D1T9 235 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 OPN1MWP04001 364 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 OPN1MW2P0DN77 364 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 OPN1MW3P0DN78 364 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 NAT2P11245 290 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 HIST1H1CP16403 213 aaKnown RBP14.24□□□□□ -0.13
NEK9-204ENST00000554258 COL10A1Q03692 680 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 TOP3AQ13472 1001 aaPredicted RBP14.24□□□□□ -0.13
NEK9-204ENST00000554258 KRR1Q13601 381 aaKnown RBP14.24□□□□□ -0.13
NEK9-204ENST00000554258 MSMPQ1L6U9 139 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 LRRC36Q1X8D7 754 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 C12orf73Q69YU5 71 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 PTCHD4Q6ZW05 846 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 LINGO2Q7L985 606 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 GALNT4Q8N4A0 578 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 IQCF1Q8N6M8 205 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 FNDC8Q8TC99 324 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 BCL2L2Q92843 193 aaPredicted RBP14.24□□□□□ -0.13
NEK9-204ENST00000554258 RASD2Q96D21 266 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 MBOAT4Q96T53 435 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 GAL3ST1Q99999 423 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 TOR3AQ9H497 397 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 CRLF2Q9HC73 371 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 CMC2Q9NRP2 79 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 WIPI2Q9Y4P8 454 aa14.24□□□□□ -0.13
NEK9-204ENST00000554258 A0A096LPE4 126 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 MDFIC2A0A1B0GVS7 189 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 A0A1W2PPZ6 126 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 SLC16A6O15403 523 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 SNAP29O95721 258 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 CSNK1A1P48729 337 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 ZNF154Q13106 437 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 THEM4Q5T1C6 240 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 SLC35F1Q5T1Q4 408 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 C10orf128Q5T292 105 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 TMEM236Q5W0B7 351 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 SLC25A47Q6Q0C1 308 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 NOXO1Q8NFA2 376 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 ST7LQ8TDW4 575 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 TIMD4Q96H15 378 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 HRASLS5Q96KN8 279 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 PITX2Q99697 317 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 MRI1Q9BV20 369 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 GPR35Q9HC97 309 aa14.23□□□□□ -0.13
NEK9-204ENST00000554258 SMPD3Q9NY59 655 aaPredicted RBP14.23□□□□□ -0.13
NEK9-204ENST00000554258 NDRG4Q9ULP0 352 aaKnown RBP14.23□□□□□ -0.13
NEK9-204ENST00000554258 IGHV3OR16-10A0A075B7F0 116 aa14.22□□□□□ -0.13
NEK9-204ENST00000554258 CLDN25C9JDP6 229 aa14.22□□□□□ -0.13
NEK9-204ENST00000554258 ZNF587BE7ETH6 402 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms