RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FAM71E2Q8N5Q1 922 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 TMEM252Q8N6L7 170 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 Q8N9W7 124 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 MDS2Q8NDY4 140 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 CCDC54Q8NEL0 328 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 OR2L3Q8NG85 312 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 OR6C4Q8NGE1 309 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 OR4A4PQ8NGN8 299 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 RHEBL1Q8TAI7 183 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 FANK1Q8TC84 345 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 ELMO1Q92556 727 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 KIFAP3Q92845 792 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 ISG20Q96AZ6 181 aaKnown RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 OR8B4Q96RC9 309 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 PANX1Q96RD7 426 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 SORT1Q99523 831 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 ATP5SQ99766 215 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 PELOQ9BRX2 385 aaKnown RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 ROGDIQ9GZN7 287 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 DNTTIP1Q9H147 329 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 RANBP3Q9H6Z4 567 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 IL26Q9NPH9 171 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 RGS18Q9NS28 235 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 EXD2Q9NVH0 621 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 B3GNT2Q9NY97 397 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 MMP17Q9ULZ9 603 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 PACSIN2Q9UNF0 486 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 ASF1AQ9Y294 204 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 FLNBO75369 2602 aaKnown RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 CEP295Q9C0D2 2601 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 FANCMQ8IYD8 2048 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 LOC400499M0QZD8 3231 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 MYH7BA7E2Y1 1941 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 ABCB11O95342 1321 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 IGSF9BQ9UPX0 1349 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 IGHV1OR21-1A0A087WYE8 117 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 GSTTP1A0A1W2PQM5 241 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 OR2AG2A6NM03 316 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 SIRPB1O00241 398 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 CDC7O00311 574 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 PES1O00541 588 aaKnown RBP2.22□□□□□ -2.05
SCFD1-210ENST00000553693 RAB29O14966 203 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 HUS1O60921 280 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 CLPXO76031 633 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 OR7A10O76100 309 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 FGF1P05230 155 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 RETP07949 1114 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 TDGF1P13385 188 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 TBPP20226 339 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 CSNK1DP48730 415 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 CX3CR1P49238 355 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 CSNK1G2P78368 415 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 ECH1Q13011 328 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 HTR4Q13639 388 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 GRB7Q14451 532 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 PRPSAP1Q14558 356 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 PTGES3Q15185 160 aaKnown RBP2.22□□□□□ -2.05
SCFD1-210ENST00000553693 SF3A2Q15428 464 aaKnown RBP2.22□□□□□ -2.05
SCFD1-210ENST00000553693 DGUOKQ16854 277 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 BEX5Q5H9J7 111 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 CLLU1OSQ5K130 101 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 PPM1LQ5SGD2 360 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 C1orf146Q5VVC0 180 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 C22orf42Q6IC83 251 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 ZNF546Q86UE3 836 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 MMAAQ8IVH4 418 aaKnown RBP2.22□□□□□ -2.05
SCFD1-210ENST00000553693 GTPBP8Q8N3Z3 284 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-210ENST00000553693 OR52K1Q8NGK4 314 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 OR52I1Q8NGK6 324 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 SLC7A13Q8TCU3 470 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 CLDN23Q96B33 292 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 ZNF707Q96C28 371 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-210ENST00000553693 TM4SF19Q96DZ7 209 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 CMTM7Q96FZ5 175 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 FOPNLQ96NB1 174 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 P2RY13Q9BPV8 354 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 TMEM59Q9BXS4 323 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 BLZF1Q9H2G9 400 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 ZC4H2Q9NQZ6 224 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 INPP5EQ9NRR6 644 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 GINS2Q9Y248 185 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 GOLT1BQ9Y3E0 138 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 MAST4O15021 2626 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 TENM4Q6N022 2769 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 LAMA1P25391 3075 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 DENND4AQ7Z401 1863 aa2.22□□□□□ -2.05
SCFD1-210ENST00000553693 IGSF10Q6WRI0 2623 aa2.21□□□□□ -2.05
SCFD1-210ENST00000553693 CLUHO75153 1309 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 CCDC171Q6TFL3 1326 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 IGLV4-69A0A075B6H9 119 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 IGHV3OR16-13A0A075B7E8 117 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 A0A1B0GTQ1 180 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 GOLGA6L7A0A1B0GV03 622 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 PSMB11A5LHX3 300 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 NKX2-6A6NCS4 301 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 A6NIZ1 184 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 SERPINE3A8MV23 424 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF705EA8MWA4 302 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 M0QZ92 97 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms