RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 PURGQ9UJV8 347 aaKnown RBP13.05□□□□□ -0.32
BRF1-220ENST00000552127 STARD10Q9Y365 291 aa13.05□□□□□ -0.32
BRF1-220ENST00000552127 BHLHE40O14503 412 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 LMO4P61968 165 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 MVKQ03426 396 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 PPP1R8Q12972 351 aaKnown RBP13.04□□□□□ -0.32
BRF1-220ENST00000552127 CDK5R2Q13319 367 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 OCLNQ16625 522 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 SLC35F1Q5T1Q4 408 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 OR2T5Q6IEZ7 315 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 SLC18B1Q6NT16 456 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 CORO6Q6QEF8 472 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 RASSF6Q6ZTQ3 369 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 AQP11Q8NBQ7 271 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 OR8D4Q8NGM9 314 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 OR2T29Q8NH02 315 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 TMEM186Q96B77 213 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 TIMD4Q96H15 378 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 CLPTM1LQ96KA5 538 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 LRGUKQ96M69 825 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 PKP2Q99959 881 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 SUCNR1Q9BXA5 334 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 REEP1Q9H902 201 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 UNKLQ9H9P5 680 aaKnown RBP13.04□□□□□ -0.32
BRF1-220ENST00000552127 TBC1D23Q9NUY8 699 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 TAS2R1Q9NYW7 299 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 IL20Q9NYY1 176 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 SAMHD1Q9Y3Z3 626 aaKnown RBP13.04□□□□□ -0.32
BRF1-220ENST00000552127 WIPI2Q9Y4P8 454 aa13.04□□□□□ -0.32
BRF1-220ENST00000552127 UBOX5O94941 541 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 GASTP01350 101 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 HLA-DQA2P01906 255 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 MSMBP08118 114 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
BRF1-220ENST00000552127 TNFAIP6P98066 277 aaPredicted RBP13.03□□□□□ -0.32
BRF1-220ENST00000552127 CFAP77Q6ZQR2 320 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 OR51F2Q8NH61 342 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 RAB1CQ92928 201 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 APOBEC3DQ96AK3 386 aaPredicted RBP13.03□□□□□ -0.32
BRF1-220ENST00000552127 HAVCR1Q96D42 359 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 CMBLQ96DG6 245 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 PTTG3PQ9NZH4 202 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 KCNG2Q9UJ96 466 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 U3KQV3 271 aa13.03□□□□□ -0.32
BRF1-220ENST00000552127 RAP2AP10114 183 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 RAC2P15153 192 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 TNFSF4P23510 183 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 PYCR1P32322 319 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 GGT2P36268 569 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 ERFP50548 548 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 SLC3A1Q07837 685 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 MICAQ29983 383 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 KRTAP27-1Q3LI81 207 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 FBLN7Q53RD9 439 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 SPRNQ5BIV9 151 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 FBXW12Q6X9E4 464 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 Q6ZR03 302 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 C1orf229Q6ZS94 237 aaPredicted RBP13.02□□□□□ -0.33
BRF1-220ENST00000552127 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 PROKR2Q8NFJ6 384 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 OR2Z1Q8NG97 314 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 OR5L1Q8NGL2 311 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 OR2AJ1Q8NGZ0 328 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 OR2T4Q8NH00 348 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 CCL17Q92583 94 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 PTP4A1Q93096 173 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 RAB39BQ96DA2 213 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 SLC6A7Q99884 636 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 ATF6BQ99941 703 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 THTPAQ9BU02 230 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 DGCR6LQ9BY27 220 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 LPAR2Q9HBW0 351 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 MRPL22Q9NWU5 206 aaKnown RBP13.02□□□□□ -0.33
BRF1-220ENST00000552127 FAM53CQ9NYF3 392 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 CYB5R1Q9UHQ9 305 aa13.02□□□□□ -0.33
BRF1-220ENST00000552127 ACOT8O14734 319 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 DEAF1O75398 565 aaPredicted RBP13.01□□□□□ -0.33
BRF1-220ENST00000552127 SOX14O95416 240 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 TRAP1Q12931 704 aaKnown RBP13.01□□□□□ -0.33
BRF1-220ENST00000552127 ECH1Q13011 328 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 GK3PQ14409 553 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 HLXQ14774 488 aaPredicted RBP13.01□□□□□ -0.33
BRF1-220ENST00000552127 TRPM8Q7Z2W7 1104 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 ADGRG5Q8IZF4 528 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 LNX2Q8N448 690 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 SLC37A3Q8NCC5 494 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 OR10G2Q8NGC3 310 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 OR4Q3Q8NH05 313 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 DDOQ99489 341 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 PITX2Q99697 317 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 CDADC1Q9BWV3 514 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 TSSK6Q9BXA6 273 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 PNRC2Q9NPJ4 139 aaKnown RBP13.01□□□□□ -0.33
BRF1-220ENST00000552127 ARMC1Q9NVT9 282 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 BAIAP2Q9UQB8 552 aa13.01□□□□□ -0.33
BRF1-220ENST00000552127 LOC105371242A0A075B767 164 aa13□□□□□ -0.33
BRF1-220ENST00000552127 TRAV20A0A0B4J274 112 aa13□□□□□ -0.33
BRF1-220ENST00000552127 AQP12BA6NM10 295 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms