RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 MEDAGQ5VYS4 303 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 LRP11Q86VZ4 500 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 ENTHD1Q8IYW4 607 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 OR51G2Q8NGK0 314 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 RHOXF1Q8NHV9 184 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 RNF133Q8WVZ7 376 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 NRG4Q8WWG1 115 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 APOBEC3DQ96AK3 386 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 ZNF799Q96GE5 643 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 MARS2Q96GW9 593 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 COG8Q96MW5 612 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 AMELYQ99218 206 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 DOK1Q99704 481 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 KCNJ15Q99712 375 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 OR2J1Q9GZK6 312 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 ZNF701Q9NV72 531 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 CLN6Q9NWW5 311 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 KLHDC2Q9Y2U9 406 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 HIVEP1P15822 2718 aa13.94□□□□□ -0.18
CHMP1A-209ENST00000550872 C2CD3Q4AC94 2353 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 A0A1W2PPW3 197 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 RRP9O43818 475 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 CLPTM1O96005 669 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 LCATP04180 440 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 H2BFMP0C1H6 154 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 ZNF250P15622 560 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 TUBG1P23258 451 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 HSD11B1P28845 292 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 PTH2RP49190 550 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 EVX1P49640 407 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 ATP5J2P56134 94 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 KLF3P57682 345 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 GRB2P62993 217 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 POU4F2Q12837 409 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 TMED1Q13445 227 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 NAA40Q86UY6 237 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 SLC35F2Q8IXU6 374 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 ZNF283Q8N7M2 679 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 OR5L1Q8NGL2 311 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 KLF14Q8TD94 323 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 PERPQ96FX8 193 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 FOXC2Q99958 501 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 VRK1Q99986 396 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 C1QTNF5Q9BXJ0 243 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 GSX2Q9BZM3 304 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 ADGRL4Q9HBW9 690 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 DYNLRB1Q9NP97 96 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 TUBG2Q9NRH3 451 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 RRP15Q9Y3B9 282 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 TMEM14AQ9Y6G1 99 aa13.93□□□□□ -0.18
CHMP1A-209ENST00000550872 SNTNA6NMZ2 147 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 J3QW42 95 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 ATP6V1G2O95670 118 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 CLIC3O95833 236 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 SBK2P0C263 348 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 GABRB1P18505 474 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 OTX1P32242 354 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 MPV17P39210 176 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 OPRL1P41146 370 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 ADARB1P78563 741 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 IL5RAQ01344 420 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 KCTD18Q6PI47 426 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 DRAM2Q6UX65 266 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 COLCA1Q6ZS62 124 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 RHOUQ7L0Q8 258 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 KRT77Q7Z794 578 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 LRRC75A-AS1Q8N1F1 130 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 Q96MT0 163 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 MNTQ99583 582 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 ADI1Q9BV57 179 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 POFUT1Q9H488 388 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 TAAR3PQ9P1P4 343 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 MYEF2Q9P2K5 600 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 FBXO9Q9UK97 447 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 COPS3Q9UNS2 423 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 N6AMT1Q9Y5N5 214 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 AKAP9Q99996 3911 aa13.92□□□□□ -0.18
CHMP1A-209ENST00000550872 IGLV3-9A0A075B6K5 115 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 ZNF670-ZNF695F2Z2N8 137 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 H7C417 338 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 M0R233 179 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 APOL3O95236 402 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 APOC1P02654 83 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 ADRA2AP08913 450 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 PAX1P15863 534 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 CAPGP40121 348 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 ALDH3B1P43353 468 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 MTNR1AP48039 350 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 MAD2L1BPQ15013 274 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 MOGQ16653 247 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 NKPD1Q17RQ9 610 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 ZNF691Q5VV52 312 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 MBNL2Q5VZF2 373 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 LRRN1Q6UXK5 716 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 SETD9Q8NE22 299 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 ASB17Q8WXJ9 295 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 CMBLQ96DG6 245 aa13.91□□□□□ -0.18
CHMP1A-209ENST00000550872 RNFT2Q96EX2 444 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms