RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 OR4Q3Q8NH05 313 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 GNPDA2Q8TDQ7 276 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 DVL3Q92997 716 aaPredicted RBP13.38□□□□□ -0.27
COX6A1-203ENST00000550009 CLPTM1LQ96KA5 538 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 MEGF10Q96KG7 1140 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 C1QTNF5Q9BXJ0 243 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 GCM1Q9NP62 436 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 BHLHE40O14503 412 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 RENP00797 406 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 GYPBP06028 91 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 T-ENOLP0DO92 83 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 RAC2P15153 192 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 CRABP1P29762 137 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 LIPAP38571 399 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 SNAI3Q3KNW1 292 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 C1QL2Q7Z5L3 287 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 MOGAT3Q86VF5 341 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 GJC3Q8NFK1 279 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 TAF15Q92804 592 aaKnown RBP eCLIP13.37□□□□□ -0.27
COX6A1-203ENST00000550009 MCUR1Q96AQ8 359 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 PITX2Q99697 317 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 COQ7Q99807 217 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 WACQ9BTA9 647 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 NDEL1Q9GZM8 345 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 CYB5R1Q9UHQ9 305 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 PPP1R3CQ9UQK1 317 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 U3KQV3 271 aa13.37□□□□□ -0.27
COX6A1-203ENST00000550009 A0A0G2JMP0 313 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 A0A0X1KG70 313 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 B2RBV5 119 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 F5H0A9 414 aaPredicted RBP13.36□□□□□ -0.27
COX6A1-203ENST00000550009 TMEM178BH3BS89 294 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 TNFRSF11BO00300 401 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 SOX14O95416 240 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 FSHBP01225 129 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 HLA-DQA2P01906 255 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 PCMT1P22061 227 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 NOS3P29474 1203 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 SMIM11AP58511 58 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 BTG1P62324 171 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 TRAP1Q12931 704 aaKnown RBP13.36□□□□□ -0.27
COX6A1-203ENST00000550009 GK2Q14410 553 aaPredicted RBP13.36□□□□□ -0.27
COX6A1-203ENST00000550009 C16orf89Q6UX73 402 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 COLCA1Q6ZS62 124 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
COX6A1-203ENST00000550009 C1orf174Q8IYL3 243 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 BCL6BQ8N143 479 aaPredicted RBP13.36□□□□□ -0.27
COX6A1-203ENST00000550009 ZNF511Q8NB15 262 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 SLC37A3Q8NCC5 494 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 DEFB108BQ8NET1 73 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 OR4M2Q8NGB6 313 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 DIRC2Q96SL1 478 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 SLC30A2Q9BRI3 323 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 C7orf69Q9H7B7 122 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 PATZ1Q9HBE1 687 aaKnown RBP13.36□□□□□ -0.27
COX6A1-203ENST00000550009 KRCC1Q9NPI7 259 aaPredicted RBP13.36□□□□□ -0.27
COX6A1-203ENST00000550009 ARMC1Q9NVT9 282 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 CGGBP1Q9UFW8 167 aaPredicted RBP13.36□□□□□ -0.27
COX6A1-203ENST00000550009 IL19Q9UHD0 177 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 TMCC3Q9ULS5 477 aa13.36□□□□□ -0.27
COX6A1-203ENST00000550009 IGHV3OR16-10A0A075B7F0 116 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 CEACAM18A8MTB9 384 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 ANPEPP15144 967 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 SLC6A9P48067 706 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 HMGA2P52926 109 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 ZMAT1Q5H9K5 638 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 KLF17Q5JT82 389 aaPredicted RBP13.35□□□□□ -0.27
COX6A1-203ENST00000550009 PRAMEF6Q5VXH4 476 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 DNM1P34Q6PK57 102 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 PEG10Q86TG7 708 aaKnown RBP13.35□□□□□ -0.27
COX6A1-203ENST00000550009 AQP11Q8NBQ7 271 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 OR2AE1Q8NHA4 323 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 APOBEC3DQ96AK3 386 aaPredicted RBP13.35□□□□□ -0.27
COX6A1-203ENST00000550009 SLCO4A1Q96BD0 722 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 DUX5Q96PT3 197 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 CCT8L2Q96SF2 557 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 ATF6BQ99941 703 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 HDHD2Q9H0R4 259 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 MED20Q9H944 212 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 PCDHB10Q9UN67 800 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 CDH10Q9Y6N8 788 aa13.35□□□□□ -0.27
COX6A1-203ENST00000550009 IQCF6A8MYZ5 107 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 C3orf80F5H4A9 247 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 LCATP04180 440 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 SLC2A1P11166 492 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 TNFSF4P23510 183 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 MAGEA2P43356 314 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 SLC3A1Q07837 685 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 MAB21L1Q13394 359 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 CRMP1Q14194 572 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 MPPED2Q15777 294 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 LYPD2Q6UXB3 125 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 SPATC1Q76KD6 591 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 TMEM179BQ7Z7N9 219 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 IQCF1Q8N6M8 205 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 ZDHHC22Q8N966 263 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 NSL1Q96IY1 281 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 HCAR1Q9BXC0 346 aa13.34□□□□□ -0.27
COX6A1-203ENST00000550009 PPP1R3EQ9H7J1 279 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms