RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 SMAD2Q15796 467 aaKnown RBP11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 MED25Q71SY5 747 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 RHOUQ7L0Q8 258 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 ZSCAN4Q8NAM6 433 aaPredicted RBP11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 PHOSPHO1Q8TCT1 267 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 TMED6Q8WW62 240 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 KTI12Q96EK9 354 aaPredicted RBP11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 AQP10Q96PS8 301 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 ADAM19Q9H013 955 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 SEC61A2Q9H9S3 476 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 RHOFQ9HBH0 211 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 SMCO4Q9NRQ5 59 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 UBQLN4Q9NRR5 601 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 ASH2LQ9UBL3 628 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 CGGBP1Q9UFW8 167 aaPredicted RBP11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 HHLA2Q9UM44 414 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 CACNA1CQ13936 2221 aa11.44□□□□□ -0.58
CALCOCO1-217ENST00000549935 EEF1E1-BLOC1S5C9J1V9 151 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 SMAD9O15198 467 aaKnown RBP11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 GMFGO60234 142 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 SEMA4FO95754 770 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 CD5P06127 495 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 SERPINF1P36955 418 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 EIF5AP63241 154 aaKnown RBP11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 MFGE8Q08431 387 aaPredicted RBP11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 PRTGQ2VWP7 1150 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 PRSS54Q6PEW0 395 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 TRAPPC6BQ86SZ2 158 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 HOGA1Q86XE5 327 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 KDF1Q8NAX2 398 aaPredicted RBP11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 TAAR8Q969N4 342 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 DNAJA3Q96EY1 480 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 RRNAD1Q96FB5 475 aaKnown RBP11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 CDCA3Q99618 268 aaPredicted RBP11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 MRPL22Q9NWU5 206 aaKnown RBP11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 VSX1Q9NZR4 365 aaPredicted RBP11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 DNAJB11Q9UBS4 358 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 FBLN5Q9UBX5 448 aa11.43□□□□□ -0.58
CALCOCO1-217ENST00000549935 IGLV1-36A0A0B4J1U3 117 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 PRSS37A4D1T9 235 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 FITM1A5D6W6 292 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 C5orf51A6NDU8 294 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 ZNF705EA8MWA4 302 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 H0YIZ8 118 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 XKRYO14609 159 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 TRIOO75962 3097 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 GPANK1O95872 356 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 F12P00748 615 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 LIPCP11150 499 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 CTSEP14091 401 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 MUC1P15941 1255 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 PTAFRP25105 342 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 PMELP40967 661 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 EIF5AL1Q6IS14 154 aaKnown RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 SLC35D2Q76EJ3 337 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 TMEM200AQ86VY9 491 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 ZNF615Q8N8J6 731 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 ADAD2Q8NCV1 583 aaKnown RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 PPP1R14AQ96A00 147 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 ZNF524Q96C55 264 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 MMABQ96EY8 250 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 ZMAT3Q9HA38 289 aaKnown RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 SEBOXQ9HB31 216 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 RAB18Q9NP72 206 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 EDARQ9UNE0 448 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 R4GMQ9 66 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 DCDC2BA2VCK2 349 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 RNASEK-C17orf49H0YIS7 233 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 MFNGO00587 321 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 BGLAPP02818 100 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 GABRG2P18507 467 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 EN2P19622 333 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 DNASE1L1P49184 302 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 HYAL1Q12794 435 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 SGCAQ16586 387 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 KCTD9Q7L273 389 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 MAMDC2Q7Z304 686 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 ZSCAN1Q8NBB4 408 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 OR51A2Q8NGJ7 313 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 ZNF519Q8TB69 540 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 C2CD4CQ8TF44 421 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 FAM46BQ96A09 425 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 OR5B2Q96R09 309 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 KLHDC3Q9BQ90 382 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 TCEAL7Q9BRU2 100 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 FN3KRPQ9HA64 309 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 ANAPC10Q9UM13 185 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 HS3ST3A1Q9Y663 406 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 PIAS3Q9Y6X2 628 aa11.42□□□□□ -0.58
CALCOCO1-217ENST00000549935 LINC00587B1AMM8 73 aa11.41□□□□□ -0.58
CALCOCO1-217ENST00000549935 TAAR5O14804 337 aa11.41□□□□□ -0.58
CALCOCO1-217ENST00000549935 ZNF264O43296 627 aa11.41□□□□□ -0.58
CALCOCO1-217ENST00000549935 CLPSP04118 112 aa11.41□□□□□ -0.58
CALCOCO1-217ENST00000549935 CSN2P05814 226 aa11.41□□□□□ -0.58
CALCOCO1-217ENST00000549935 IGHV4-34P06331 123 aa11.41□□□□□ -0.58
CALCOCO1-217ENST00000549935 S100A9P06702 114 aaKnown RBP11.41□□□□□ -0.58
CALCOCO1-217ENST00000549935 FABP1P07148 127 aa11.41□□□□□ -0.58
CALCOCO1-217ENST00000549935 FCGR3AP08637 254 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms