RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 GMEB1Q9Y692 573 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 AQRO60306 1485 aaKnown RBP eCLIP2.01□□□□□ -2.09
CCDC38-208ENST00000549876 A0A1B0GVI7 797 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 A0A1B0GW55 424 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 PDZK1P1A8MUH7 402 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 E7EWF7 191 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 H0YHG0 523 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 LAD1O00515 517 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 NUPL2O15504 423 aaKnown RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 RRP8O43159 456 aaKnown RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 RAD51CO43502 376 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 GMDSO60547 372 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 TNFSF13O75888 250 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 SRP72O76094 671 aaKnown RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 AIFM1O95831 613 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 ARG1P05089 322 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 KLK1P06870 262 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 CHTF8P0CG12 524 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 DUX4L2P0CJ85 424 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 DUX4L3P0CJ86 424 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 DUX4L5P0CJ88 424 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 DUX4L6P0CJ89 424 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 DUX4L7P0CJ90 424 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 CCL2P13500 99 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 ICAM2P13598 275 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 GFAPP14136 432 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 IVDP26440 423 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 BTCP35070 178 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 SPAM1P38567 509 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 CLDN6P56747 220 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 FZD2Q14332 565 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 KIAA0087Q14695 138 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 USF2Q15853 346 aaPredicted RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF726P1Q15940 193 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 C5orf64Q2M2E5 130 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 C18orf21Q32NC0 220 aaPredicted RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 C5orf47Q569G3 176 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 CCNJQ5T5M9 372 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 ADNP2Q6IQ32 1131 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 DEGS2Q6QHC5 323 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 DUX4L9Q6RFH8 374 aaPredicted RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 NPSR1Q6W5P4 371 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 LINC00336Q6ZUF6 198 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 TMEM179Q6ZVK1 233 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 H2AFVQ71UI9 128 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 OR2W3Q7Z3T1 314 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 C6orf120Q7Z4R8 191 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 SNX20Q7Z614 316 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 RALGPS2Q86X27 583 aaPredicted RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF547Q8IVP9 402 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 OR2L8Q8NGY9 312 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 OR2G3Q8NGZ4 309 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 TCP10LQ8TDR4 215 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 EEF1AKMT3Q96AZ1 226 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 GLT1D1Q96MS3 346 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 TSSK3Q96PN8 268 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 FOXC2Q99958 501 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 KCNS3Q9BQ31 491 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 LZTS2Q9BRK4 669 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 CALN1Q9BXU9 219 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 OR11A1Q9GZK7 315 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 RAB1BQ9H0U4 201 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 RPF2Q9H7B2 306 aaKnown RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 UGT1A7Q9HAW7 530 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 UGT1A8Q9HAW9 530 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 MRM3Q9HC36 420 aaKnown RBP2□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF302Q9NR11 478 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 MCUBQ9NWR8 336 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 ADA2Q9NZK5 511 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 CHMP5Q9NZZ3 219 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 DUX4Q9UBX2 424 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 KCNE3Q9Y6H6 103 aa2□□□□□ -2.09
CCDC38-208ENST00000549876 A0A0G2JN53 185 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 OR6C74A6NCV1 312 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 H3BN98 237 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 PLPP1O14494 284 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 CETN3O15182 167 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 ERI3O43414 337 aaKnown RBP1.99□□□□□ -2.09
CCDC38-208ENST00000549876 DPM1O60762 260 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 SLC19A2O60779 497 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 VAPBO95292 243 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 UTS2O95399 124 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 LCA5LO95447 670 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 MRPL3P09001 348 aaKnown RBP1.99□□□□□ -2.09
CCDC38-208ENST00000549876 CSF3P09919 207 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 SMIM10L1P0DMW3 83 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 IGHV3-43DP0DP04 118 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 CALM1P0DP23 149 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 CALM2P0DP24 149 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 CALM3P0DP25 149 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 TDGF1P13385 188 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 RAB4AP20338 218 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 F2RP25116 425 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 SLC26A3P40879 764 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 KCNJ3P48549 501 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 TDGF1P3P51864 188 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 ATP6V0D1P61421 351 aa1.99□□□□□ -2.09
CCDC38-208ENST00000549876 NUTF2P61970 127 aaKnown RBP1.99□□□□□ -2.09
CCDC38-208ENST00000549876 RPS21P63220 83 aaKnown RBP1.99□□□□□ -2.09
CCDC38-208ENST00000549876 SEMG2Q02383 582 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms