RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 EVX1P49640 407 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 RGS6P49758 472 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 KLF3P57682 345 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 SNRPGP62308 76 aaKnown RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 GRB2P62993 217 aaKnown RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 MAD2L1BPQ15013 274 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 OCLNQ16625 522 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 MOGQ16653 247 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 MEDAGQ5VYS4 303 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 TTC23Q5W5X9 447 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 KRT77Q7Z794 578 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 LRRC75A-AS1Q8N1F1 130 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 ZCCHC24Q8N2G6 241 aaKnown RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 ZNF283Q8N7M2 679 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 OR51G2Q8NGK0 314 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 OTOSQ8NHW6 89 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 KLF14Q8TD94 323 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 ST7LQ8TDW4 575 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 IPCEF1Q8WWN9 437 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 RFKQ969G6 155 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 APOBEC3DQ96AK3 386 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 COG8Q96MW5 612 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 AMELYQ99218 206 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 APOL4Q9BPW4 351 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 GSX2Q9BZM3 304 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 YIPF3Q9GZM5 350 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 RAB1BQ9H0U4 201 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 VCXQ9H320 206 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 POFUT1Q9H488 388 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 TUBG2Q9NRH3 451 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 ZNF701Q9NV72 531 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 CLN6Q9NWW5 311 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 SLCO1C1Q9NYB5 712 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 HAO2Q9NYQ3 351 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 MYEF2Q9P2K5 600 aaKnown RBP8.24□□□□□ -1.09
RAB5B-205ENST00000549034 ATPIF1Q9UII2 106 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 GPR160Q9UJ42 338 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 DCHS2Q6V1P9 2916 aa8.24□□□□□ -1.09
RAB5B-205ENST00000549034 SNTNA6NMZ2 147 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 ZNF878C9JN71 531 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 M0R135 149 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 PSMD9O00233 223 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 SSX4O60224 188 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 MPZL2O60487 215 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 CLIC3O95833 236 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 SBK2P0C263 348 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 NAT2P11245 290 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 PAX1P15863 534 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 IL5RAQ01344 420 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 TMED1Q13445 227 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 NKPD1Q17RQ9 610 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 KRTAP27-1Q3LI81 207 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 SLC25A30Q5SVS4 291 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 MBNL2Q5VZF2 373 aaKnown RBP8.23□□□□□ -1.09
RAB5B-205ENST00000549034 KCTD18Q6PI47 426 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-205ENST00000549034 DRAM2Q6UX65 266 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 LRRN1Q6UXK5 716 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 RFPL4BQ6ZWI9 263 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 SLC35F2Q8IXU6 374 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 ENTHD1Q8IYW4 607 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 RHOXF1Q8NHV9 184 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 RNF133Q8WVZ7 376 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 HAVCR1Q96D42 359 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 ZNF799Q96GE5 643 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 Q96MT0 163 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 CNN2Q99439 309 aaKnown RBP8.23□□□□□ -1.09
RAB5B-205ENST00000549034 TBX5Q99593 518 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 C1QTNF5Q9BXJ0 243 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 MS4A5Q9H3V2 200 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 ADGRL4Q9HBW9 690 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 BRD7Q9NPI1 651 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 DDX28Q9NUL7 540 aaKnown RBP8.23□□□□□ -1.09
RAB5B-205ENST00000549034 FBXO9Q9UK97 447 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-205ENST00000549034 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.23□□□□□ -1.09
RAB5B-205ENST00000549034 COPS3Q9UNS2 423 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 KLHDC2Q9Y2U9 406 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 TMEM14AQ9Y6G1 99 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 FBN2P35556 2912 aa8.23□□□□□ -1.09
RAB5B-205ENST00000549034 IGLV3-9A0A075B6K5 115 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 ZNF670-ZNF695F2Z2N8 137 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 H7C417 338 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 M0R233 179 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 TBX1O43435 398 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 TIMM8AO60220 97 aaPredicted RBP8.22□□□□□ -1.09
RAB5B-205ENST00000549034 ICMTO60725 284 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 APOL3O95236 402 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 ATP6V1G2O95670 118 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 F12P00748 615 aaPredicted RBP8.22□□□□□ -1.09
RAB5B-205ENST00000549034 IGHV3-13P01766 116 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 IGHV4-39P01824 125 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 APOC1P02654 83 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 ANXA2P07355 339 aaKnown RBP8.22□□□□□ -1.09
RAB5B-205ENST00000549034 ERCC1P07992 297 aaPredicted RBP8.22□□□□□ -1.09
RAB5B-205ENST00000549034 OR2T7P0C7T2 308 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 SLC2A1P11166 492 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 MTNR1AP48039 350 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 CX3CR1P49238 355 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 CXCR4P61073 352 aa8.22□□□□□ -1.09
RAB5B-205ENST00000549034 ADARB1P78563 741 aaKnown RBP8.22□□□□□ -1.09
RAB5B-205ENST00000549034 POU4F2Q12837 409 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms