RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TUBAL3A6NHL2 446 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 GATCO43716 136 aaKnown RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 PRKNO60260 465 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 WISP3O95389 354 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 LALBAP00709 142 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 QDPRP09417 244 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 PCMT1P22061 227 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 WNT4P56705 351 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 SYT14P1Q58G82 188 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 AVPI1Q5T686 147 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 LCN10Q6JVE6 187 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 HAS2Q92819 552 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 MBOAT4Q96T53 435 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 NMNAT3Q96T66 252 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 OR11A1Q9GZK7 315 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 RAB1BQ9H0U4 201 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 TMEM74BQ9NUR3 256 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 MRPL15Q9P015 296 aaKnown RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 PIGLQ9Y2B2 252 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 A0A0A6YYJ9 748 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 A0A1W2PR48 441 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 H7C1Q1 480 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 CTSVO60911 334 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 TUBG1P23258 451 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 GLRA1P23415 457 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 RPS19P39019 145 aaKnown RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 HSF1Q00613 529 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 INSM1Q01101 510 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 TSPAN31Q12999 210 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 P2RY14Q15391 338 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 OLIG3Q7RTU3 272 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 ARL6IP6Q8N6S5 226 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF251Q9BRH9 671 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 EXO1Q9UQ84 846 aaKnown RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 A3GALT2U3KPV4 340 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 ARID1AO14497 2285 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 NINQ8N4C6 2090 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 MDFIC2A0A1B0GVS7 189 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF736B4DX44 427 aaPredicted RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 DEGS1O15121 323 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 SRP9P49458 86 aaKnown RBP7.79□□□□□ -1.16
CLIP1-218ENST00000545889 TNK1Q13470 666 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 COTL1Q14019 142 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 ETFDHQ16134 617 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 PRTGQ2VWP7 1150 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 HFEQ30201 348 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 ACSM3Q53FZ2 586 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 KRBOX4Q5JUW0 171 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 OVCH1Q7RTY7 1134 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 SULF2Q8IWU5 870 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 OR8J2Q8NGG1 315 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 CD300LFQ8TDQ1 290 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 SFT2D1Q8WV19 159 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 C4orf36Q96KX1 117 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 MRGPRX4Q96LA9 322 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 SSUH2Q9Y2M2 353 aa7.79□□□□□ -1.16
CLIP1-218ENST00000545889 LTBP2Q14767 1821 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 IGHV5-51A0A0C4DH38 117 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 C21orf140B9A014 251 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CSF3P09919 207 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF728P0DKX0 622 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 TMIGD3P0DMS9 266 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 GRB2P62993 217 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 PROX2Q3B8N5 592 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 PMS2CLQ68D20 193 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 MEPCEQ7L2J0 689 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 PXKQ7Z7A4 578 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CA13Q8N1Q1 262 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 C9orf62Q8N4C0 152 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 AMER3Q8N944 861 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 OR5T1Q8NG75 326 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 OR52H1Q8NGJ2 320 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CT55Q8WUE5 264 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 RAB1CQ92928 201 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 PIGTQ969N2 578 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CREB3L1Q96BA8 519 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 DUS3LQ96G46 650 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 UNKLQ9H9P5 680 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 UBTD1Q9HAC8 227 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 SYT5O00445 386 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CDX4O14627 284 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CDC14BO60729 498 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 SBK2P0C263 348 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 MMP11P24347 488 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF136P52737 540 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 BAMBIQ13145 260 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 ASAH1Q13510 395 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 EIF2S3LQ2VIR3 472 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CCDC190Q86UF4 302 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 Q96M85 177 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 SCN2AQ99250 2005 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 SELENOIQ9C0D9 397 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF275Q9NSD4 429 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 NOTCH3Q9UM47 2321 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 A0A1W2PPV4 95 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 FAM74A7A6NL05 159 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 TNFSF11O14788 317 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 SPRY3O43610 288 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 HYAL3O43820 417 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms