RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 AQP3Q92482 292 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 C5orf34Q96MH7 638 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 IGHV1OR21-1A0A087WYE8 117 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 SLC2A1P11166 492 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 MGMTP16455 207 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 AKR1C4P17516 323 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 VAMP1P23763 118 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 HRH1P35367 487 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 RNF4P78317 190 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 PTCRAQ6ISU1 281 aaPredicted RBP14.08□□□□□ -0.16
LDLR-204ENST00000545707 HSD17B13Q7Z5P4 300 aaPredicted RBP14.08□□□□□ -0.16
LDLR-204ENST00000545707 C11orf40Q8WZ69 217 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 KCNK17Q96T54 332 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 ZNF471Q9BX82 626 aaPredicted RBP14.08□□□□□ -0.16
LDLR-204ENST00000545707 SELENOIQ9C0D9 397 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 CPAMD8Q8IZJ3 1885 aa14.08□□□□□ -0.16
LDLR-204ENST00000545707 OR2AT4A6NND4 320 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 DISC1C4P0D8 188 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 EEF1E1-BLOC1S5C9J1V9 151 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 LMO7DNF2Z398 122 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 CD8AP01732 235 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 TTRP02766 147 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 ISG15P05161 165 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 ZBTB25P24278 435 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 CD27P26842 260 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 BDKRB2P30411 391 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 BIDP55957 195 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 HSF1Q00613 529 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 TDGQ13569 410 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 ZNF273Q14593 569 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 TMEM244Q5VVB8 128 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 C11orf87Q6NUJ2 197 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 TFAP2EQ6VUC0 442 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 ZNF704Q6ZNC4 412 aaPredicted RBP14.07□□□□□ -0.16
LDLR-204ENST00000545707 H1FNTQ75WM6 255 aaPredicted RBP14.07□□□□□ -0.16
LDLR-204ENST00000545707 NICN1Q9BSH3 213 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 TNFSF18Q9UNG2 199 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 LOC390937A0A1W2PQ73 354 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 CPED1A4D0V7 1026 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 RNF222A6NCQ9 220 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 METTL21EPA6NDL7 271 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 ATP6V1G2-DDX39BF2Z307 99 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 ZNF217O75362 1048 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 VSIG8P0DPA2 414 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 STARP49675 285 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 FOXK1P85037 733 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 OR10S1Q8NGN2 331 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 SLAMF6Q96DU3 332 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 MVB12AQ96EY5 273 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 SLCO5A1Q9H2Y9 848 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 SLC2A4RGQ9NR83 387 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 FAM206AQ9NX38 181 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 RASL12Q9NYN1 266 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 COMMD9Q9P000 198 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 GPN3Q9UHW5 284 aaPredicted RBP14.07□□□□□ -0.16
LDLR-204ENST00000545707 FER1L5A0AVI2 2057 aa14.07□□□□□ -0.16
LDLR-204ENST00000545707 KANTRA0A1W2PQU2 76 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 BET1O15155 118 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 SYT7O43581 403 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 STK17BO94768 372 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 PMP2P02689 132 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 ERCC1P07992 297 aaPredicted RBP14.06□□□□□ -0.16
LDLR-204ENST00000545707 NAGAP17050 411 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 DLSTP36957 453 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 IL13RA1P78552 427 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 FOXF1Q12946 379 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 INPP5JQ15735 1006 aaPredicted RBP14.06□□□□□ -0.16
LDLR-204ENST00000545707 COX15Q7KZN9 410 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 KCNRGQ8N5I3 272 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 OR52H1Q8NGJ2 320 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 FN3KRPQ9HA64 309 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 SLC22A11Q9NSA0 550 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 RAB22AQ9UL26 194 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 KCNK7Q9Y2U2 307 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 VPS13AQ96RL7 3174 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 FRYLO94915 3013 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 C9orf170A2RU37 121 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 METTL12A8MUP2 240 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 EFNA2O43921 213 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 CDAP32320 146 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 PRKXP51817 358 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 MFAP5Q13361 173 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 UNQ6126/PRO20091Q6UXV3 157 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 SYT13Q7L8C5 426 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 LYG2Q86SG7 212 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 SLC25A42Q86VD7 318 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 OR51E1Q8TCB6 317 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 RNF133Q8WVZ7 376 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 FBXW5Q969U6 566 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 PBOV1Q9GZY1 135 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 SEC61A2Q9H9S3 476 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 LMAN1LQ9HAT1 526 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 FGF21Q9NSA1 209 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 TAS2R3Q9NYW6 316 aa14.06□□□□□ -0.16
LDLR-204ENST00000545707 A0A0D9SG52 128 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 UBBP0CG47 229 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 UBCP0CG48 685 aaKnown RBP14.05□□□□□ -0.16
LDLR-204ENST00000545707 ABOP16442 354 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 AGTR1P30556 359 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 RPS27AP62979 156 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms