RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 PROCRQ9UNN8 238 aa26.61■■□□□ 1.85
CCM2-219ENST00000544363 TLN1Q9Y490 2541 aaKnown RBP26.6■■□□□ 1.85
CCM2-219ENST00000544363 A0A1W2PPK0 400 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 OR6C6A6NF89 314 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 F5H5K5 113 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 ZZEF1O43149 2961 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 CGAP01215 116 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 APOC1P02654 83 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 IGHV1-2P23083 117 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 MYL9P24844 172 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 CEACAM8P31997 349 aaPredicted RBP26.6■■□□□ 1.85
CCM2-219ENST00000544363 MAGEB1P43366 347 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 RBPJQ06330 500 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 NAXEQ8NCW5 288 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 OR51A4Q8NGJ6 313 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 SLC25A46Q96AG3 418 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 DERL3Q96Q80 235 aa26.6■■□□□ 1.85
CCM2-219ENST00000544363 MAP1BP46821 2468 aaKnown RBP26.6■■□□□ 1.85
CCM2-219ENST00000544363 ACOD1A6NK06 481 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 TTRP02766 147 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 UBCP0CG48 685 aaKnown RBP26.59■■□□□ 1.85
CCM2-219ENST00000544363 GLI4P10075 376 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 CRYGSP22914 178 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 MAPK3P27361 379 aaPredicted RBP26.59■■□□□ 1.85
CCM2-219ENST00000544363 RORCP51449 518 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 TGFBR3Q03167 851 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 TMEM244Q5VVB8 128 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 SLC7A6Q92536 515 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 NOX4Q9NPH5 578 aa26.59■■□□□ 1.85
CCM2-219ENST00000544363 ARPC4-TTLL3A0A0A6YYG9 625 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 PIN1P1O15428 100 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 HLA-HP01893 362 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 ACHEP22303 614 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 HSD17B12Q53GQ0 312 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 PABPC1L2AQ5JQF8 200 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 DPPA2Q7Z7J5 298 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 THRSPQ92748 146 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 BARHL1Q9BZE3 327 aa26.58■■□□□ 1.85
CCM2-219ENST00000544363 TRAV1-2A0A0B4J238 106 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 M0R135 149 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 DBHP09172 617 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 SLC2A1P11166 492 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 HTR5AP47898 357 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 SOX2P48431 317 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 LY6DQ14210 128 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 KRTAP27-1Q3LI81 207 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 ZNF404Q494X3 552 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 PRSS45Q7RTY3 260 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 MCFD2Q8NI22 146 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 ZNF799Q96GE5 643 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 NXF2Q9GZY0 626 aaKnown RBP26.57■■□□□ 1.84
CCM2-219ENST00000544363 SLC24A3Q9HC58 644 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 SLC17A5Q9NRA2 495 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 HHLA2Q9UM44 414 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 DSPP15924 2871 aaKnown RBP26.57■■□□□ 1.84
CCM2-219ENST00000544363 H3BSH0 61 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 ERVH48-1M5A8F1 160 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 ANXA2P07355 339 aaKnown RBP26.57■■□□□ 1.84
CCM2-219ENST00000544363 ARR3P36575 388 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 HIKESHIQ53FT3 197 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 FAM57BQ71RH2 274 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 TPRA1Q86W33 373 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 ZNF610Q8N9Z0 462 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 OR8B12Q8NGG6 310 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 TBC1D15Q8TC07 691 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 TSEN15Q8WW01 171 aaKnown RBP26.57■■□□□ 1.84
CCM2-219ENST00000544363 ATPIF1Q9UII2 106 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 TINAGQ9UJW2 476 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 N6AMT1Q9Y5N5 214 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 A3GALT2U3KPV4 340 aa26.57■■□□□ 1.84
CCM2-219ENST00000544363 ZGRF1Q86YA3 2104 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 LOC107986453A0A1B0GWG9 222 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 ZNF503-AS2A6NEH8 195 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 P2RY10O00398 339 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 UBL3O95164 117 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 RAF1P04049 648 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 ACSM4P0C7M7 580 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 CD79AP11912 226 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 COX5AP20674 150 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 TPTEP56180 551 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 HNRNPA0Q13151 305 aaKnown RBP26.56■■□□□ 1.84
CCM2-219ENST00000544363 TBRG1Q3YBR2 411 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 TMEM53Q6P2H8 277 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 NAA40Q86UY6 237 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 GABRG1Q8N1C3 465 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 ZNF433Q8N7K0 673 aaPredicted RBP26.56■■□□□ 1.84
CCM2-219ENST00000544363 SFXN3Q9BWM7 321 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 OPN3Q9H1Y3 402 aaPredicted RBP26.56■■□□□ 1.84
CCM2-219ENST00000544363 MMP27Q9H306 513 aa26.56■■□□□ 1.84
CCM2-219ENST00000544363 TRBV5-7A0A0A0MS05 114 aa26.55■■□□□ 1.84
CCM2-219ENST00000544363 SLC6A9P48067 706 aa26.55■■□□□ 1.84
CCM2-219ENST00000544363 DRAM2Q6UX65 266 aa26.55■■□□□ 1.84
CCM2-219ENST00000544363 NANOS1Q8WY41 292 aaKnown RBP26.55■■□□□ 1.84
CCM2-219ENST00000544363 TMEM106AQ96A25 262 aa26.55■■□□□ 1.84
CCM2-219ENST00000544363 DHDHQ9UQ10 334 aa26.55■■□□□ 1.84
CCM2-219ENST00000544363 SMIM30A4D0T7 59 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 LYZL6O75951 148 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 SRMP19623 302 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 RAB1AP62820 205 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 INTS1Q8N201 2190 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms