RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 C3orf80F5H4A9 247 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 RER1O15258 196 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 FAM20BO75063 409 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 LIPFP07098 398 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 ZNF26P17031 533 aaPredicted RBP12.78□□□□□ -0.36
CD4-212ENST00000544344 RGS6P49758 472 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 NPY4RP50391 375 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 PRSS12P56730 875 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 MPPED2Q15777 294 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 RSPO1Q2MKA7 263 aaPredicted RBP12.78□□□□□ -0.36
CD4-212ENST00000544344 LHX4Q969G2 390 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 TLCD1Q96CP7 247 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 TECTBQ96PL2 329 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 WDR76Q9H967 626 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 BAG5Q9UL15 447 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 A4GNTQ9UNA3 340 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 ADAM18Q9Y3Q7 739 aa12.78□□□□□ -0.36
CD4-212ENST00000544344 HTR3EA5X5Y0 456 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 TSPAN9O75954 239 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 CSF1P09603 554 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 FPR3P25089 353 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 COX10Q12887 443 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 PRAMEF6Q5VXH4 476 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 CD276Q5ZPR3 534 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 GDPGP1Q6ZNW5 385 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 COLCA1Q6ZS62 124 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 FAM122BQ7Z309 247 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 CALHM3Q86XJ0 350 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 NRMQ8IXM6 262 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 CELF2-AS1Q8N7Q2 184 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 OR5L1Q8NGL2 311 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 OR13C2Q8NGS9 318 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 APOBEC3DQ96AK3 386 aaPredicted RBP12.77□□□□□ -0.37
CD4-212ENST00000544344 Q96M85 177 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 TMEM100Q9NV29 134 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 KIF17Q9P2E2 1029 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 ATPIF1Q9UII2 106 aa12.77□□□□□ -0.37
CD4-212ENST00000544344 NOTCH3Q9UM47 2321 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 ZNF816-ZNF321PA0A0X1KG74 233 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 PRSS37A4D1T9 235 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 IMPA2O14732 288 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 PIN1P1O15428 100 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 AHCYL1O43865 530 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 OPN1MWP04001 364 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 OPN1MW2P0DN77 364 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 OPN1MW3P0DN78 364 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 CD200P41217 278 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 LSM6P62312 80 aaKnown RBP12.76□□□□□ -0.37
CD4-212ENST00000544344 HIST1H3AP68431 136 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 PRKCDQ05655 676 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 NFYCQ13952 458 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 ANKDD1AQ495B1 522 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 HIST2H3PS2Q5TEC6 136 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 METTL11BQ5VVY1 283 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 HIST2H3AQ71DI3 136 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 OAFQ86UD1 273 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 FAM156AQ8NDB6 213 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 RASSF4Q9H2L5 321 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 ERVK-18Q9QC07 812 aa12.76□□□□□ -0.37
CD4-212ENST00000544344 COA3Q9Y2R0 106 aaPredicted RBP12.76□□□□□ -0.37
CD4-212ENST00000544344 ANGPT2O15123 496 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 IRF2P14316 349 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 ARF6P62330 175 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 EGR3Q06889 387 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 ST3GAL3Q11203 375 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 RABL3Q5HYI8 236 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 SFRP4Q6FHJ7 346 aaPredicted RBP12.75□□□□□ -0.37
CD4-212ENST00000544344 NANOGP8Q6NSW7 305 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 PDZD9Q8IXQ8 264 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 PNLDC1Q8NA58 520 aaKnown RBP12.75□□□□□ -0.37
CD4-212ENST00000544344 OR11L1Q8NGX0 322 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 PRRC1Q96M27 445 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 ECSITQ9BQ95 431 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 SEMA6AQ9H2E6 1030 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 DPAGT1Q9H3H5 408 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 MMADHCQ9H3L0 296 aaPredicted RBP12.75□□□□□ -0.37
CD4-212ENST00000544344 RABEP2Q9H5N1 569 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 UFSP2Q9NUQ7 469 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 GRHPRQ9UBQ7 328 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
CD4-212ENST00000544344 EFCAB9A8MZ26 197 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 LGALS8O00214 317 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 CDC42EP2O14613 210 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 PTBP3O95758 552 aaKnown RBP12.74□□□□□ -0.37
CD4-212ENST00000544344 CD14P08571 375 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 GK2Q14410 553 aaPredicted RBP12.74□□□□□ -0.37
CD4-212ENST00000544344 FAM189A2Q15884 450 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 KCNMB1Q16558 191 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 DHRS7BQ6IAN0 325 aaPredicted RBP12.74□□□□□ -0.37
CD4-212ENST00000544344 GLB1L2Q8IW92 636 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 SCCPDHQ8NBX0 429 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 COQ7Q99807 217 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 SYT4Q9H2B2 425 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 ZNRD1Q9P1U0 126 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 VPREB3Q9UKI3 123 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 LHFPL6Q9Y693 200 aa12.74□□□□□ -0.37
CD4-212ENST00000544344 FXYD1O00168 92 aa12.73□□□□□ -0.37
CD4-212ENST00000544344 FFAR1O14842 300 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms