RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 UNQ6126/PRO20091Q6UXV3 157 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 COLCA1Q6ZS62 124 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 SLC35F2Q8IXU6 374 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 OR51G2Q8NGK0 314 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 RHOXF1Q8NHV9 184 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 KLF14Q8TD94 323 aaPredicted RBP12.94□□□□□ -0.34
CD9-210ENST00000543916 CYGBQ8WWM9 190 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 IPCEF1Q8WWN9 437 aaPredicted RBP12.94□□□□□ -0.34
CD9-210ENST00000543916 SPTSSAQ969W0 71 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 ZNF799Q96GE5 643 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 KCNJ15Q99712 375 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 C1QTNF5Q9BXJ0 243 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 TTTY10Q9BZA0 68 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 LAMP5Q9UJQ1 280 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 NOTCH2Q04721 2471 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 RTTNQ86VV8 2226 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 C5orf63A6NC05 138 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 PRR32B1ATL7 298 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 J3QW42 95 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 ATP6V1G2O95670 118 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 IGHV4-39P01824 125 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 SBK2P0C263 348 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 PPOXP50336 477 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 PRKXP51817 358 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 NUDT6P53370 316 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 GRB2P62993 217 aaKnown RBP12.93□□□□□ -0.34
CD9-210ENST00000543916 TAF13Q15543 124 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 TESK1Q15569 626 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 ALKBH6Q3KRA9 238 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 ZNF718Q3SXZ3 478 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 ZNF691Q5VV52 312 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 MBNL2Q5VZF2 373 aaKnown RBP12.93□□□□□ -0.34
CD9-210ENST00000543916 LRRN1Q6UXK5 716 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 KRTAP1-3Q8IUG1 177 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 C1orf174Q8IYL3 243 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 LRRC75A-AS1Q8N1F1 130 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 ZCCHC24Q8N2G6 241 aaKnown RBP12.93□□□□□ -0.34
CD9-210ENST00000543916 DHRSXQ8N5I4 330 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 RFKQ969G6 155 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 APOBEC3DQ96AK3 386 aaPredicted RBP12.93□□□□□ -0.34
CD9-210ENST00000543916 PTTG3PQ9NZH4 202 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 PMF1-BGLAPU3KQ54 211 aa12.93□□□□□ -0.34
CD9-210ENST00000543916 MAST4O15021 2626 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 A0A1W2PPW3 197 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 H3BSA7 217 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 IGHV3-13P01766 116 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 LCATP04180 440 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 H2BFMP0C1H6 154 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 SLC2A1P11166 492 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 GCH1P30793 250 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 ALDH3B1P43353 468 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 SLC6A9P48067 706 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 CX3CR1P49238 355 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 ATP5J2P56134 94 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 TMED1Q13445 227 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 RIPK1Q13546 671 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 SNAI3Q3KNW1 292 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 MEDAGQ5VYS4 303 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 TTC23Q5W5X9 447 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 DRAM2Q6UX65 266 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 RHOUQ7L0Q8 258 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 ZNF283Q8N7M2 679 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 APH1BQ8WW43 257 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 GTF3AQ92664 365 aaKnown RBP12.92□□□□□ -0.34
CD9-210ENST00000543916 TRMT61AQ96FX7 289 aaKnown RBP12.92□□□□□ -0.34
CD9-210ENST00000543916 SORCS2Q96PQ0 1159 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 APOL4Q9BPW4 351 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 ADI1Q9BV57 179 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 VCXQ9H320 206 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 DYNLRB1Q9NP97 96 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 CLN6Q9NWW5 311 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 SLCO1C1Q9NYB5 712 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 TAAR3PQ9P1P4 343 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 RRP15Q9Y3B9 282 aaKnown RBP12.92□□□□□ -0.34
CD9-210ENST00000543916 LRP12Q9Y561 859 aa12.92□□□□□ -0.34
CD9-210ENST00000543916 M0R233 179 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 PSMD9O00233 223 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 MPZL2O60487 215 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 ADRA2AP08913 450 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 BMP4P12644 408 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 TUBG1P23258 451 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 HSD11B1P28845 292 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 CAPGP40121 348 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 SLC15A1P46059 708 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 MTNR1AP48039 350 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 AQP4P55087 323 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 SELENOVP59797 346 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 IL5RAQ01344 420 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 ZNF91Q05481 1191 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 POU4F2Q12837 409 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 PSG7Q13046 419 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 HLXQ14774 488 aaPredicted RBP12.91□□□□□ -0.34
CD9-210ENST00000543916 SSX6Q7RTT6 188 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 RNFT2Q96EX2 444 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 COG8Q96MW5 612 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 TBX5Q99593 518 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 VRK1Q99986 396 aaPredicted RBP12.91□□□□□ -0.34
CD9-210ENST00000543916 TPK1Q9H3S4 243 aa12.91□□□□□ -0.34
CD9-210ENST00000543916 TUBG2Q9NRH3 451 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms