RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FAM74A7A6NL05 159 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 OR2AT4A6NND4 320 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 FTCDNL1E5RQL4 147 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 F5H0A9 414 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-208ENST00000543633 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
VPS33A-208ENST00000543633 NUDT14O95848 222 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 CRHP06850 196 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 TPT1P13693 172 aaKnown RBP12.27□□□□□ -0.45
VPS33A-208ENST00000543633 QRFPP83859 136 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 PLCXD2Q0VAA5 305 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 FAM74A3Q4VXF1 159 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 C10orf91Q5T1B1 145 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 MARCH3Q86UD3 253 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 ACBD4Q8NC06 268 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 GPR119Q8TDV5 335 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 ASB10Q8WXI3 467 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 PMEPA1Q969W9 287 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 MRGPRFQ96AM1 343 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 GAS2L1Q99501 681 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-208ENST00000543633 LRRC61Q9BV99 259 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 PISDQ9UG56 409 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 SHPKQ9UHJ6 478 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 COA3Q9Y2R0 106 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-208ENST00000543633 CARHSP1Q9Y2V2 147 aaKnown RBP12.27□□□□□ -0.45
VPS33A-208ENST00000543633 CEACAM18A8MTB9 384 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 CCSO14618 274 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 EFSO43281 561 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 FCER2P06734 321 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
VPS33A-208ENST00000543633 ERCC1P07992 297 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-208ENST00000543633 ZNF542PQ5EBM4 170 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 ZNF529Q6P280 563 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 LINC00518Q8N0U6 118 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 METTL27Q8N6F8 245 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-208ENST00000543633 OR4K17Q8NGC6 315 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 RNF133Q8WVZ7 376 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 TMEM234Q8WY98 164 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 DAZLQ92904 295 aaKnown RBP12.26□□□□□ -0.45
VPS33A-208ENST00000543633 ARL11Q969Q4 196 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 PIK3IP1Q96FE7 263 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 GAL3ST4Q96RP7 486 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 RAB33BQ9H082 229 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 HPF1Q9NWY4 346 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 MBD2Q9UBB5 411 aa12.26□□□□□ -0.45
VPS33A-208ENST00000543633 TMEM269A0A1B0GVZ9 245 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 PRKNO60260 465 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-208ENST00000543633 PLATP00750 562 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 PSMB6P28072 239 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 C1orf61Q13536 156 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 FAM189A2Q15884 450 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 TMEM31Q5JXX7 168 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 AWAT2Q6E213 333 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 POMZP3Q6PJE2 187 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 PGAP1Q75T13 922 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 DCXRQ7Z4W1 244 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 MDGA2Q7Z553 956 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 C9orf40Q8IXQ3 194 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 PRR22Q8IZ63 422 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 ZNF441Q8N8Z8 693 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 OR5AP2Q8NGF4 316 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 OR1S2Q8NGQ3 325 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 ELP5Q8TE02 316 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 FOXN4Q96NZ1 517 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 TSNAXQ99598 290 aaKnown RBP12.25□□□□□ -0.45
VPS33A-208ENST00000543633 WWTR1Q9GZV5 400 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 CNTD2Q9H8S5 307 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 MOB1AQ9H8S9 216 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 CHMP1AQ9HD42 196 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-208ENST00000543633 SOHLH2Q9NX45 425 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 SLC39A1Q9NY26 324 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 SLC5A6Q9Y289 635 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 WIPF3A6NGB9 483 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 C2CD4DB7Z1M9 353 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 ZNF208O43345 1280 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 FADS1O60427 444 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 IFNA6P05013 189 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 CHRM2P08172 466 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 GSTP1P09211 210 aaKnown RBP12.25□□□□□ -0.45
VPS33A-208ENST00000543633 H2BFMP0C1H6 154 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 LYL1P12980 280 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 ABCD3P28288 659 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 UNC119Q13432 240 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 STK11Q15831 433 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 NKPD1Q17RQ9 610 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 LRRC37A5PQ49AS3 106 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 DRAM2Q6UX65 266 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 SLC29A4Q7RTT9 530 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 HOGA1Q86XE5 327 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 PAQR4Q8N4S7 273 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-208ENST00000543633 OR1M1Q8NGA1 313 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 OR4S1Q8NGB4 309 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 ST8SIA1Q92185 356 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 SEC22AQ96IW7 307 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 KCNK17Q96T54 332 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 CUTCQ9NTM9 273 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 FAM206AQ9NX38 181 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 COPS7AQ9UBW8 275 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 PIAS3Q9Y6X2 628 aa12.25□□□□□ -0.45
VPS33A-208ENST00000543633 THADAQ6YHU6 1953 aa12.24□□□□□ -0.45
VPS33A-208ENST00000543633 TMEM14DPA8MWL7 114 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms