RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 Q96MF0 132 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 SORCS2Q96PQ0 1159 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 COPS4Q9BT78 406 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 C1QTNF5Q9BXJ0 243 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 YIPF3Q9GZM5 350 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 TOR3AQ9H497 397 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 MYOZ1Q9NP98 299 aaPredicted RBP12.15□□□□□ -0.46
DDX11-221ENST00000542661 C8orf4Q9NR00 106 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 CYSLTR2Q9NS75 346 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 CENPMQ9NSP4 180 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 IMPAD1Q9NX62 359 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 MYEF2Q9P2K5 600 aaKnown RBP12.15□□□□□ -0.46
DDX11-221ENST00000542661 STARD10Q9Y365 291 aa12.15□□□□□ -0.46
DDX11-221ENST00000542661 ZNF469Q96JG9 3925 aaPredicted RBP12.15□□□□□ -0.46
DDX11-221ENST00000542661 PLSCR5A0PG75 271 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 M0R135 149 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 LYNP07948 512 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 PSKH1P11801 424 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 ANPEPP15144 967 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 RAC2P15153 192 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 FOSL1P15407 271 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 OTX1P32242 354 aaPredicted RBP12.14□□□□□ -0.47
DDX11-221ENST00000542661 MPV17P39210 176 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 ALDH3B1P43353 468 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 MALLQ13021 153 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 RCN1Q15293 331 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 PCGF3Q3KNV8 242 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 COLCA1Q6ZS62 124 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 SLC16A9Q7RTY1 509 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 RNF133Q8WVZ7 376 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 RFKQ969G6 155 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 ZNF799Q96GE5 643 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 RDH12Q96NR8 316 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 IL4I1Q96RQ9 567 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 KCNJ15Q99712 375 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 RHNO1Q9BSD3 238 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 ABHD6Q9BV23 337 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 SP140LQ9H930 580 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 TMEM14AQ9Y6G1 99 aa12.14□□□□□ -0.47
DDX11-221ENST00000542661 CCDC182A6NF36 153 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 ERICH4A6NGS2 130 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 C17orf100A8MU93 164 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 M0R129 80 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 SELENOFO60613 162 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 LCATP04180 440 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 CD99P14209 185 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 KITLGP21583 273 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 NAA10P41227 235 aaPredicted RBP12.13□□□□□ -0.47
DDX11-221ENST00000542661 SLC6A9P48067 706 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 GGTLC2Q14390 218 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 MAD2L1BPQ15013 274 aaPredicted RBP12.13□□□□□ -0.47
DDX11-221ENST00000542661 TRIP10Q15642 601 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 ZIK1Q3SY52 487 aaPredicted RBP12.13□□□□□ -0.47
DDX11-221ENST00000542661 FBXW12Q6X9E4 464 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 DNM1P46Q6ZS02 220 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 ZCCHC24Q8N2G6 241 aaKnown RBP12.13□□□□□ -0.47
DDX11-221ENST00000542661 FAM81AQ8TBF8 368 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 HAVCR1Q96D42 359 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 CMBLQ96DG6 245 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 CNN2Q99439 309 aaKnown RBP12.13□□□□□ -0.47
DDX11-221ENST00000542661 MNTQ99583 582 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 SLC29A1Q99808 456 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 HAO2Q9NYQ3 351 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 NKIRAS2Q9NYR9 191 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 WARS2Q9UGM6 360 aaKnown RBP12.13□□□□□ -0.47
DDX11-221ENST00000542661 LAMP5Q9UJQ1 280 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 MED13LQ71F56 2210 aa12.13□□□□□ -0.47
DDX11-221ENST00000542661 E9PQ18 207 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 NDUFS8O00217 210 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 TIMM8AO60220 97 aaPredicted RBP12.12□□□□□ -0.47
DDX11-221ENST00000542661 H2BFMP0C1H6 154 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 NAT2P11245 290 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 SELEP16581 610 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 HSD11B1P28845 292 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 OPRL1P41146 370 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 PDLIM4P50479 330 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 ZNF81P51508 661 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 POU4F2Q12837 409 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 PSG7Q13046 419 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 TMED1Q13445 227 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 FAM209AQ5JX71 171 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 KCTD18Q6PI47 426 aaPredicted RBP12.12□□□□□ -0.47
DDX11-221ENST00000542661 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.12□□□□□ -0.47
DDX11-221ENST00000542661 PACRGLQ8N7B6 248 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 ASB17Q8WXJ9 295 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 FAM168AQ92567 244 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 DIRC2Q96SL1 478 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 TPK1Q9H3S4 243 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 POFUT1Q9H488 388 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 DCLRE1BQ9H816 532 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 NIPAL2Q9H841 368 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 PTTG3PQ9NZH4 202 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 PURGQ9UJV8 347 aaKnown RBP12.12□□□□□ -0.47
DDX11-221ENST00000542661 ZDHHC8Q9ULC8 765 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 GMPPBQ9Y5P6 360 aa12.12□□□□□ -0.47
DDX11-221ENST00000542661 TLN2Q9Y4G6 2542 aa12.11□□□□□ -0.47
DDX11-221ENST00000542661 LOC390937A0A1W2PQ73 354 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms