RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TMEM33P57088 247 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 LSM6P62312 80 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 DHODHQ02127 395 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SRSF5Q13243 272 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 C2orf68Q2NKX9 166 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ARHGAP11BQ3KRB8 267 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF322Q6U7Q0 402 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 GLDNQ6ZMI3 551 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC29A4Q7RTT9 530 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 VRK2Q86Y07 508 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC25A45Q8N413 288 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 BHLHE23Q8NDY6 225 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2V1Q8NHB1 315 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC25A32Q9H2D1 315 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 HIPK2Q9H2X6 1198 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 FN3KQ9H479 309 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 EXO5Q9H790 373 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 METTL7AQ9H8H3 244 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ASB6Q9NWX5 421 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 CNIH4Q9P003 139 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 KLK11Q9UBX7 282 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 DKKL1Q9UK85 242 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 SIT1Q9Y3P8 196 aa7.2□□□□□ -1.26
PDLIM5-221ENST00000542407 ADAMTS20P59510 1910 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 UBE2QL1A1L167 161 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 ZC3H12DA2A288 527 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TLCD2A6NGC4 264 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 BCAT2O15382 392 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 SRPX2O60687 465 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 OR8U8P0C7N1 319 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 METTL15P1P0C7V9 234 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 S1PR1P21453 382 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 CNR1P21554 472 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 RPS4Y1P22090 263 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 H2BFSP57053 126 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 IGLV3-21P80748 117 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 CFHR1Q03591 330 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 SURF2Q15527 256 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 DNLZQ5SXM8 178 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 H3F3CQ6NXT2 135 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TUSC5Q8IXB3 177 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 MORN4Q8NDC4 146 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM104Q8NE00 496 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 OR10H4Q8NGA5 316 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 OR13C5Q8NGS8 318 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 DOK4Q8TEW6 326 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 NPRL2Q8WTW4 380 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TNFAIP8L1Q8WVP5 186 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM231Q9H6L2 316 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM184BQ9Y519 407 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A0A6YYC8 382 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 CENPVL1A0A0U1RR11 272 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM218A2RU14 115 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2M5A3KFT3 312 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 I3L1I5 382 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 ACOT7O00154 380 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TGOLN2O43493 480 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 CSF2RBP32927 897 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 ATXN7L3Q14CW9 347 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 LINC00303Q3SY05 128 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 SCGB2B2Q4G0G5 96 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 NKAIN1Q4KMZ8 207 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 DCAF12L2Q5VW00 463 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 NKAIN2Q5VXU1 208 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 LEMD1Q68G75 181 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 SULF2Q8IWU5 870 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 SPICQ8N5J4 248 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 DEFB123Q8N688 67 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF485Q8NCK3 441 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 RCBTB1Q8NDN9 531 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 OR52I2Q8NH67 350 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 KCTD12Q96CX2 325 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 PRRC1Q96M27 445 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 DIRC2Q96SL1 478 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 CNN2Q99439 309 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 TTTY10Q9BZA0 68 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF350Q9GZX5 532 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 ZMAT3Q9HA38 289 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 CALML5Q9NZT1 146 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 CHRNA9Q9UGM1 479 aa7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF223Q9UK11 482 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A1W2PRV1 198 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 OR14I1A6ND48 311 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 SERPINE3A8MV23 424 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 F5H5P2 479 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 K7EP13 123 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 TP53I11O14683 189 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 HYAL3O43820 417 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2J2O76002 312 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC2A10O95528 541 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 IGHV2-5P01817 119 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC35E2P0CK97 266 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ATF1P18846 271 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 GLRA1P23415 457 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 NPBWR1P48145 328 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 COMPP49747 757 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 PPT1P50897 306 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ART1P52961 327 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 CDK5Q00535 292 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 FAM53BQ14153 422 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms