RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 UNQ9370/PRO34162Q6UXP9 181 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 B3GLCTQ6Y288 498 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 DPY19L4Q7Z388 723 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 MDGA2Q7Z553 956 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 DPPA2Q7Z7J5 298 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 CCDC190Q86UF4 302 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 GPAT4Q86UL3 456 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 LRRC28Q86X40 367 aaPredicted RBP7.36□□□□□ -1.23
CHD4-208ENST00000540960 MFSD4AQ8N468 514 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 MDS2Q8NDY4 140 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 OR2M7Q8NG81 312 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 OR6N1Q8NGY5 312 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 OR2G2Q8NGZ5 317 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 LINC01560Q8TB33 94 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 RNF128Q8TEB7 428 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 CHPT1Q8WUD6 406 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 TPK1Q9H3S4 243 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 RNF122Q9H9V4 155 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 PROK2Q9HC23 129 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 GP6Q9HCN6 339 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 TCF7L1Q9HCS4 588 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 ACKR4Q9NPB9 350 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 ACOXLQ9NUZ1 547 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 METRNQ9UJH8 293 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 MCTS1Q9ULC4 181 aaKnown RBP7.36□□□□□ -1.23
CHD4-208ENST00000540960 COA3Q9Y2R0 106 aaPredicted RBP7.36□□□□□ -1.23
CHD4-208ENST00000540960 POLR1DQ9Y2S0 133 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 SCN2AQ99250 2005 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 CD8B2A6NJW9 211 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 RNF223E7ERA6 249 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 TRAF3IP2O43734 574 aaPredicted RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 CD5LO43866 347 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 EFNA2O43921 213 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 NME2P1O60361 137 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 PTTG1O95997 202 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 ISG15P05161 165 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 ERCC1P07992 297 aaPredicted RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 PGA4P0DJD7 388 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 PGA3P0DJD8 388 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 CD8BP10966 210 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 EPXP11678 715 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 FCGR2AP12318 317 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 BMP4P12644 408 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 CTLA4P16410 223 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 NME2P22392 152 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 APEX1P27695 318 aaKnown RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 TNFSF8P32971 234 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 DNASE1L1P49184 302 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 MMP16P51512 607 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 ZNF133P52736 654 aaPredicted RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 SUCLG1P53597 346 aaKnown RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 GRB2P62993 217 aaKnown RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 MXD1Q05195 221 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 SLC10A1Q14973 349 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 RNPS1Q15287 305 aaKnown RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 HIST3H3Q16695 136 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 MEP1BQ16820 701 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 C10orf128Q5T292 105 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 C12orf54Q6X4T0 127 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 TMEM91Q6ZNR0 172 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 CREB3L2Q70SY1 520 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 GALNTL5Q7Z4T8 443 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 ABHD12BQ7Z5M8 362 aaPredicted RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 ZFP41Q8N8Y5 198 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 FAM83FQ8NEG4 500 aaPredicted RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 GJC3Q8NFK1 279 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 OR9K2Q8NGE7 335 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 ZNF524Q96C55 264 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 FOXRED1Q96CU9 486 aaPredicted RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 SCMH1Q96GD3 660 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 DIRAS2Q96HU8 199 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 PGLYRP3Q96LB9 341 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 TIMP4Q99727 224 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 KCNS3Q9BQ31 491 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 ABHD6Q9BV23 337 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 TP63Q9H3D4 680 aaPredicted RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 ZCCHC4Q9H5U6 513 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 ELOVL3Q9HB03 270 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 GLTPQ9NZD2 209 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 B3GAT1Q9P2W7 334 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 MRM2Q9UI43 246 aaKnown RBP7.35□□□□□ -1.23
CHD4-208ENST00000540960 HHLA2Q9UM44 414 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 ETV7Q9Y603 341 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 R4GMQ9 66 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 PMF1-BGLAPU3KQ54 211 aa7.35□□□□□ -1.23
CHD4-208ENST00000540960 VWFP04275 2813 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 KIAA1549Q9HCM3 1950 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 TRBV5-5A0A0J9YX44 114 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 A0A1W2PNR3 127 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 TVP23AA6NH52 213 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 LRRC3CA6NJW4 275 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 OR4C45A6NMZ5 311 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 A8MV72 311 aaPredicted RBP7.34□□□□□ -1.23
CHD4-208ENST00000540960 ZNF878C9JN71 531 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 H7C1C5 153 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 EIF1AYO14602 144 aaKnown RBP7.34□□□□□ -1.23
CHD4-208ENST00000540960 UPK3AO75631 287 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 NEURL1O76050 574 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 LALBAP00709 142 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 QDPRP09417 244 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms