RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 INTS14Q96SY0 518 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 CIB1Q99828 191 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 COPS4Q9BT78 406 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 TUBG2Q9NRH3 451 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 PTTG3PQ9NZH4 202 aa7.88□□□□□ -1.15
SNHG1-215ENST00000540904 TMEFF2Q9UIK5 374 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-215ENST00000540904 ZSCAN5BA6NJL1 495 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 ZAR1LA6NP61 321 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 J3QW42 95 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 M0R129 80 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 M0R135 149 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 NDUFS8O00217 210 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 PRODHO43272 600 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 PRKYO43930 277 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 SELENOFO60613 162 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 NCR1O76036 304 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 LCATP04180 440 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 USF1P22415 310 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-215ENST00000540904 POLR2IP36954 125 aaKnown RBP7.87□□□□□ -1.15
SNHG1-215ENST00000540904 NR4A2P43354 598 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 MMP15P51511 669 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 TPTEP56180 551 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 PPP2R2BQ00005 443 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 APOFQ13790 326 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 GGTLC2Q14390 218 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 HLXQ14774 488 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-215ENST00000540904 TAF13Q15543 124 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 TSTQ16762 297 aaKnown RBP7.87□□□□□ -1.15
SNHG1-215ENST00000540904 PCK2Q16822 640 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 PCGF3Q3KNV8 242 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 KRTAP27-1Q3LI81 207 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 TEX30Q5JUR7 227 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 COLCA1Q6ZS62 124 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 TIGD4Q8IY51 512 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 OR5AS1Q8N127 324 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF786Q8N393 782 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF540Q8NDQ6 660 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 ST7LQ8TDW4 575 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 RDH5Q92781 318 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 HAVCR1Q96D42 359 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 SLAMF6Q96DU3 332 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF799Q96GE5 643 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 RBM4BQ9BQ04 359 aaKnown RBP7.87□□□□□ -1.15
SNHG1-215ENST00000540904 C1QTNF5Q9BXJ0 243 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 PRRG3Q9BZD7 231 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 BPESC1Q9GZL8 116 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 RIBC2Q9H4K1 309 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 MSL2Q9HCI7 577 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 CYSLTR2Q9NS75 346 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 DECR2Q9NUI1 292 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 DDX28Q9NUL7 540 aaKnown RBP7.87□□□□□ -1.15
SNHG1-215ENST00000540904 ENOPH1Q9UHY7 261 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 PURGQ9UJV8 347 aaKnown RBP7.87□□□□□ -1.15
SNHG1-215ENST00000540904 ARFGEF3Q5TH69 2177 aa7.87□□□□□ -1.15
SNHG1-215ENST00000540904 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 ACANP16112 2415 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 A0A096LNT2 108 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 VWC2LB2RUY7 222 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF878C9JN71 531 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 TLX2O43763 284 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-215ENST00000540904 CDC14BO60729 498 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 IGHV1-46P01743 117 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 HEXAP06865 529 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 RAC2P15153 192 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 KITLGP21583 273 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 COL8A2P25067 703 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 GIFP27352 417 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 LIPAP38571 399 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 NAA10P41227 235 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-215ENST00000540904 PRKXP51817 358 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 PRSS12P56730 875 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 LOXL1Q08397 574 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-215ENST00000540904 MALLQ13021 153 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 ZMAT1Q5H9K5 638 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 SLC35D3Q5M8T2 416 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 SLX4IPQ5VYV7 408 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 C12orf73Q69YU5 71 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 OR2T2Q6IF00 324 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 FBXW12Q6X9E4 464 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 SHFQ7M4L6 423 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 BCDIN3DQ7Z5W3 292 aaKnown RBP7.86□□□□□ -1.15
SNHG1-215ENST00000540904 TCEANCQ8N8B7 351 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 THEM6Q8WUY1 208 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 YIPF5Q969M3 257 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 IL4I1Q96RQ9 567 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 ABHD6Q9BV23 337 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 OSBPL10Q9BXB5 764 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 MARCH7Q9H992 704 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 CHODLQ9H9P2 273 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 SAP30LQ9HAJ7 183 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 S100A14Q9HCY8 104 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 NKIRAS2Q9NYR9 191 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 CGGBP1Q9UFW8 167 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-215ENST00000540904 N6AMT1Q9Y5N5 214 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 ORC6Q9Y5N6 252 aa7.86□□□□□ -1.15
SNHG1-215ENST00000540904 FLNAP21333 2647 aaKnown RBP7.86□□□□□ -1.15
SNHG1-215ENST00000540904 TEP1Q99973 2627 aaKnown RBP7.86□□□□□ -1.15
SNHG1-215ENST00000540904 RTTNQ86VV8 2226 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 IGHV4-61A0A0C4DH41 118 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 IGHV1-69-2A0A0G2JMI3 117 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms