RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 OR52E2Q8NGJ4 325 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 OR13C5Q8NGS8 318 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 OR5AK2Q8NH90 309 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 PFN4Q8NHR9 129 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 ARL11Q969Q4 196 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 MCHR2Q969V1 340 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 MEGF10Q96KG7 1140 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 TAAR9Q96RI9 348 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 SERINC2Q96SA4 455 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 APOOQ9BUR5 198 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 DDA1Q9BW61 102 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 TWSG1Q9GZX9 223 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 TUBA4BQ9H853 241 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 LYRM4Q9HD34 91 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 FANCFQ9NPI8 374 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 MKKSQ9NPJ1 570 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 MBNL1Q9NR56 388 aaKnown RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.87□□□□□ -1.31
CCDC60-204ENST00000539847 C20orf141Q9NUB4 165 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 POT1Q9NUX5 634 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 GNG8Q9UK08 70 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 HEBP2Q9Y5Z4 205 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 TMEM14AQ9Y6G1 99 aa6.87□□□□□ -1.31
CCDC60-204ENST00000539847 A0A0B4J2A0 478 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 TEX13DA0A0J9YY54 714 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 TMEM272A0A1B0GTI8 110 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 A0A1B0GWA3 101 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 OR4C45A6NMZ5 311 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 SLC17A2O00624 439 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 NUPL2O15504 423 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 GATCO43716 136 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 UPK3AO75631 287 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 CTAG2O75638 210 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 NKX2-2O95096 273 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 SPDEFO95238 335 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 NTN1O95631 604 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 S100A9P06702 114 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 S100A6P06703 90 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 TPT1P13693 172 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 GTF2F2P13984 249 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 HIST1H1CP16403 213 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ABOP16442 354 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ADRA2CP18825 462 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 TBPP20226 339 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ACAA2P42765 397 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 PPICP45877 212 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 SLC6A9P48067 706 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 UBE2MP61081 183 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 TNFRSF17Q02223 184 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 INPP5JQ15735 1006 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 CDNFQ49AH0 187 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 DCST2Q5T1A1 773 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 LINC01590Q5TEZ4 76 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 NKAIN2Q5VXU1 208 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 C18orf63Q68DL7 685 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 MTFR2Q6P444 385 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 C11orf88Q6PI97 169 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 FAM220AQ7Z4H9 259 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 SLC25A42Q86VD7 318 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 LDLRAD3Q86YD5 345 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF440Q8IYI8 595 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 PUSL1Q8N0Z8 303 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 GABRG1Q8N1C3 465 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF433Q8N7K0 673 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 OR6S1Q8NH40 331 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 OR8K3Q8NH51 312 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 OR51A7Q8NH64 312 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 SFT2D1Q8WV19 159 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 RGP1Q92546 391 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 TM4SF19Q96DZ7 209 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ZMYND19Q96E35 227 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ARL5BQ96KC2 179 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 Q96M66 194 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 PDCD1LG2Q9BQ51 273 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 NUDT16L1Q9BRJ7 211 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ESRP2Q9H6T0 727 aaKnown RBP6.86□□□□□ -1.31
CCDC60-204ENST00000539847 EXO5Q9H790 373 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 TMEM185BQ9H7F4 350 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 MMP26Q9NRE1 261 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 FOXJ2Q9P0K8 574 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 LRIT1Q9P2V4 623 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 SLC23A2Q9UGH3 650 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 SHPKQ9UHJ6 478 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 PLAGL1Q9UM63 463 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 ZNF337Q9Y3M9 751 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 PLEKHM1Q9Y4G2 1056 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 IER3IP1Q9Y5U9 82 aa6.86□□□□□ -1.31
CCDC60-204ENST00000539847 CCDC88CQ9P219 2028 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 A0A1W2PPK0 400 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 GLOD5A6NK44 160 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 PCP4L1A6NKN8 68 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 B4E171 279 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 PPM1DO15297 605 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 SCGNO76038 276 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 SIX6O95475 246 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 RAB3DO95716 219 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ABHD16AO95870 558 aa6.85□□□□□ -1.31
CCDC60-204ENST00000539847 ANXA2P07355 339 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms