RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 RAB33BQ9H082 229 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 FAM206AQ9NX38 181 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 TAS2R8Q9NYW2 309 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 RABL2AQ9UBK7 228 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 RABL2BQ9UNT1 228 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 PLEKHA6Q9Y2H5 1048 aa12.51□□□□□ -0.41
UBE3B-210ENST00000539599 COL5A1P20908 1838 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-210ENST00000539599 RAB27BO00194 218 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 LDLRAD4O15165 306 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 OR2T1O43869 369 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 FOSL2P15408 326 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 CXADRP78310 365 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 SHBQ15464 509 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 RGS7BPQ6MZT1 257 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-210ENST00000539599 C12orf45Q8N5I9 185 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-210ENST00000539599 FAM71F1Q96KD3 344 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-210ENST00000539599 WDR77Q9BQA1 342 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-210ENST00000539599 PBOV1Q9GZY1 135 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 CST11Q9H112 138 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 CHST11Q9NPF2 352 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 GPR160Q9UJ42 338 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 POLR1DQ9Y2S0 133 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 EXPH5Q8NEV8 1989 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 BCAT2O15382 392 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-210ENST00000539599 SYT7O43581 403 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 PMP2P02689 132 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 VSIG8P0DPA2 414 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 PI3P19957 117 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 HRH1P35367 487 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 EPHA4P54764 986 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 BTN1A1Q13410 526 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 TAF13Q15543 124 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 NKAIN1Q4KMZ8 207 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 MAFIPQ8WZ33 124 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 OR5B2Q96R09 309 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 FN3KRPQ9HA64 309 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 KLHL13Q9P2N7 655 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 ASH2LQ9UBL3 628 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 ADAMTS20P59510 1910 aa12.5□□□□□ -0.41
UBE3B-210ENST00000539599 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 IGHV3-15A0A0B4J1V0 119 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 ANKUB1A6NFN9 424 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 LIPT2A6NK58 231 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 TSPAN4O14817 238 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 IGHMP01871 453 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 AKR1C4P17516 323 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 ACTBP60709 375 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 ACTG1P63261 375 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 PPP1R1AQ13522 171 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 TMPPEQ6ZT21 453 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 KCTD9Q7L273 389 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 LYPD6Q86Y78 171 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF584Q8IVC4 421 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 C15orf40Q8WUR7 153 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 SLC39A7Q92504 469 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF775Q96BV0 537 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-210ENST00000539599 LHFPL6Q9Y693 200 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 A0A1W2PQM1 296 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 MFSD2BA6NFX1 497 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 OR2AT4A6NND4 320 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 VAMP1P23763 118 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 CD96P40200 585 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 ATP1B3P54709 279 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 BEST3Q8N1M1 668 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 OR10H5Q8NGA6 315 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 RNF133Q8WVZ7 376 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 ROBO4Q8WZ75 1007 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 PDCD10Q9BUL8 212 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 PHF7Q9BWX1 381 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-210ENST00000539599 PPP4R1LQ9P1A2 415 aa12.49□□□□□ -0.41
UBE3B-210ENST00000539599 A0A0A6YYD4 124 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 TEX51A0A1B0GUA7 166 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 SCRG1O75711 98 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 OR3A4PP47883 348 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 CAPZA1P52907 286 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 C17orf67Q0P5P2 114 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF260Q3ZCT1 412 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 AWAT2Q6E213 333 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 ABHD12BQ7Z5M8 362 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-210ENST00000539599 ANGPTL5Q86XS5 388 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF101Q8IZC7 436 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 ZBTB44Q8NCP5 570 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 PLPP5Q8NEB5 264 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 OR1S1Q8NH92 325 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 TMEM234Q8WY98 164 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 CHRNA10Q9GZZ6 450 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 KCNK7Q9Y2U2 307 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 PRRC2CQ9Y520 2896 aaKnown RBP12.48□□□□□ -0.41
UBE3B-210ENST00000539599 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 FSTP19883 344 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 BDKRB2P30411 391 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 PTGDSP41222 190 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 CLDN6P56747 220 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 SMAD4Q13485 552 aaKnown RBP12.48□□□□□ -0.41
UBE3B-210ENST00000539599 GK2Q14410 553 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF546Q86UE3 836 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 TMEM229BQ8NBD8 167 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 LIN37Q96GY3 246 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms