RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 DDX28Q9NUL7 540 aaKnown RBP9.8□□□□□ -0.84
RTN3-209ENST00000538995 MRPL22Q9NWU5 206 aaKnown RBP9.8□□□□□ -0.84
RTN3-209ENST00000538995 TREM2Q9NZC2 230 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 IL19Q9UHD0 177 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 CACNG2Q9Y698 323 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 U3KQV3 271 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 FAM157AC9JC47 383 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 IFNL4K9M1U5 179 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 GYG2O15488 501 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 DEAF1O75398 565 aaPredicted RBP9.79□□□□□ -0.84
RTN3-209ENST00000538995 CST1P01037 141 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 IFNGP01579 166 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 IGHV2-5P01817 119 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 ACSM4P0C7M7 580 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 ZNF823P16415 610 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 SELEP16581 610 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 BLVRAP53004 296 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 MVKQ03426 396 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 ZNF362Q5T0B9 420 aaPredicted RBP9.79□□□□□ -0.84
RTN3-209ENST00000538995 AVPI1Q5T686 147 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 ACSM5Q6NUN0 579 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 Q6ZR03 302 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 LINC00346Q8IVM7 164 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 TEX29Q8N6K0 151 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 CYB561A3Q8NBI2 242 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 SLC37A3Q8NCC5 494 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 OR2Z1Q8NG97 314 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 TMEM158Q8WZ71 300 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 RBM4Q9BWF3 364 aaKnown RBP9.79□□□□□ -0.84
RTN3-209ENST00000538995 NMNAT2Q9BZQ4 307 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 YY1AP1Q9H869 796 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 HIF1ANQ9NWT6 349 aa9.79□□□□□ -0.84
RTN3-209ENST00000538995 FBN3Q75N90 2809 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 A0A1B0GWJ7 208 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 RIIAD1A6NNX1 92 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 IQCF6A8MYZ5 107 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 PHF1O43189 567 aaPredicted RBP9.78□□□□□ -0.84
RTN3-209ENST00000538995 SOX14O95416 240 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 ZNF3P17036 446 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 OTX1P32242 354 aaPredicted RBP9.78□□□□□ -0.84
RTN3-209ENST00000538995 PYCR1P32322 319 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 TPTEP56180 551 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 PPP1R8Q12972 351 aaKnown RBP9.78□□□□□ -0.84
RTN3-209ENST00000538995 MALLQ13021 153 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 SCGB2A2Q13296 93 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 CRMP1Q14194 572 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 FLOT2Q14254 428 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 HLXQ14774 488 aaPredicted RBP9.78□□□□□ -0.84
RTN3-209ENST00000538995 PCK2Q16822 640 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 RSPO1Q2MKA7 263 aaPredicted RBP9.78□□□□□ -0.84
RTN3-209ENST00000538995 IL17RELQ6ZVW7 336 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 ZNF283Q8N7M2 679 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 OR8G5Q8NG78 346 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 OR13G1Q8NGZ3 307 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 OR4Q3Q8NH05 313 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 TEX47Q8TBZ9 253 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 GIPC3Q8TF64 312 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 CANT1Q8WVQ1 401 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 SPTSSAQ969W0 71 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 MAP6Q96JE9 813 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 ZNF582Q96NG8 517 aaPredicted RBP9.78□□□□□ -0.84
RTN3-209ENST00000538995 GAL3ST1Q99999 423 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 HCAR1Q9BXC0 346 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 CMC2Q9NRP2 79 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 TMEM106BQ9NUM4 274 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 ARMC1Q9NVT9 282 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 PTTG3PQ9NZH4 202 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 NPTNQ9Y639 398 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 COMMD3-BMI1R4GMX3 469 aa9.78□□□□□ -0.84
RTN3-209ENST00000538995 RNF212BA8MTL3 300 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 F5H5K5 113 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 M0R135 149 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 DNAJC8O75937 253 aaPredicted RBP9.77□□□□□ -0.85
RTN3-209ENST00000538995 IGHV2-70P01814 119 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 SPI1P17947 270 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 GATA3P23771 443 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 FMO3P31513 532 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 GRK5P34947 590 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 SRP14P37108 136 aaKnown RBP9.77□□□□□ -0.85
RTN3-209ENST00000538995 ENTPD1P49961 510 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 ERFP50548 548 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 DBPQ10586 325 aaPredicted RBP9.77□□□□□ -0.85
RTN3-209ENST00000538995 TMEM155Q4W5P6 130 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 TEX30Q5JUR7 227 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 OR2T2Q6IF00 324 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 SPICQ8N5J4 248 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 OR10S1Q8NGN2 331 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 OR9Q1Q8NGQ5 310 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 SLC7A6OSQ96CW6 309 aaPredicted RBP9.77□□□□□ -0.85
RTN3-209ENST00000538995 ZNF799Q96GE5 643 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 OR2V2Q96R30 315 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 FEVQ99581 238 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 NIPSNAP1Q9BPW8 284 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 SLC30A2Q9BRI3 323 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 LPAR2Q9HBW0 351 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 PPP1R3CQ9UQK1 317 aa9.77□□□□□ -0.85
RTN3-209ENST00000538995 A0A0G2JMP0 313 aa9.76□□□□□ -0.85
RTN3-209ENST00000538995 A0A0X1KG70 313 aa9.76□□□□□ -0.85
RTN3-209ENST00000538995 TCRBV3S1A0A5B6 114 aa9.76□□□□□ -0.85
RTN3-209ENST00000538995 ISPDA4D126 451 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms