RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 PRMT9Q6P2P2 845 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 Q6ZVH6 145 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 COX18Q8N8Q8 333 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 PIH1D2Q8WWB5 315 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 RAB1CQ92928 201 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 RPEQ96AT9 228 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 FOPNLQ96NB1 174 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 ZNF382Q96SR6 550 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 BCL7BQ9BQE9 202 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 NDFIP1Q9BT67 221 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 CALN1Q9BXU9 219 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
PRKDC-208ENST00000536710 HMG20AQ9NP66 347 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 MYOZ1Q9NP98 299 aaPredicted RBP3.42□□□□□ -1.86
PRKDC-208ENST00000536710 PEF1Q9UBV8 284 aaKnown RBP3.42□□□□□ -1.86
PRKDC-208ENST00000536710 CAMTA1Q9Y6Y1 1673 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 MROH7Q68CQ1 1323 aa3.42□□□□□ -1.86
PRKDC-208ENST00000536710 SERPINE3A8MV23 424 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 XRCC2O43543 280 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 RP2O75695 350 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 FARS2O95363 451 aaKnown RBP3.41□□□□□ -1.86
PRKDC-208ENST00000536710 AZU1P20160 251 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 USF1P22415 310 aaPredicted RBP3.41□□□□□ -1.86
PRKDC-208ENST00000536710 SLC11A1P49279 550 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 PSMD4P55036 377 aaKnown RBP3.41□□□□□ -1.86
PRKDC-208ENST00000536710 CLDN18P56856 261 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 ZNF121P58317 390 aaPredicted RBP3.41□□□□□ -1.86
PRKDC-208ENST00000536710 DAOAP59103 153 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 CHRFAM7AQ494W8 412 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 FAM122BQ7Z309 247 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 SNX20Q7Z614 316 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 VTCN1Q7Z7D3 282 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 RIMKLAQ8IXN7 391 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 OR10G2Q8NGC3 310 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 DCPSQ96C86 337 aaKnown RBP3.41□□□□□ -1.86
PRKDC-208ENST00000536710 STARD4Q96DR4 205 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 CSPG4P5Q96PW8 444 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 UQCC2Q9BRT2 126 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 UBE2ZQ9H832 354 aaPredicted RBP3.41□□□□□ -1.86
PRKDC-208ENST00000536710 C12orf10Q9HB07 376 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 DYRK4Q9NR20 520 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 HYOU1Q9Y4L1 999 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 SCN2AQ99250 2005 aa3.41□□□□□ -1.86
PRKDC-208ENST00000536710 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 A6NDN8 102 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 ZBTB5O15062 677 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 FOXH1O75593 365 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 CTDNEP1O95476 244 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 TDP2O95551 362 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 MSR1P21757 451 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 RBM34P42696 430 aaKnown RBP3.4□□□□□ -1.87
PRKDC-208ENST00000536710 PRR3P79522 188 aaKnown RBP3.4□□□□□ -1.87
PRKDC-208ENST00000536710 SMUG1Q53HV7 270 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 TCEAL5Q5H9L2 206 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 MLIPQ5VWP3 458 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 UNC93AQ86WB7 457 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 CALHM1Q8IU99 346 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 NKAIN4Q8IVV8 208 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 ARRDC1Q8N5I2 433 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 TRAM1L1Q8N609 369 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 GPR26Q8NDV2 337 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 OR5T3Q8NGG3 340 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 COQ8AQ8NI60 647 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 SYNPRQ8TBG9 265 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 RGP1Q92546 391 aaPredicted RBP3.4□□□□□ -1.87
PRKDC-208ENST00000536710 TCEAL3Q969E4 200 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 ZNF707Q96C28 371 aaPredicted RBP3.4□□□□□ -1.87
PRKDC-208ENST00000536710 RNF145Q96MT1 663 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 IL22Q9GZX6 179 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 MYOZ2Q9NPC6 264 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 MED4Q9NPJ6 270 aa3.4□□□□□ -1.87
PRKDC-208ENST00000536710 COL16A1Q07092 1604 aaPredicted RBP3.4□□□□□ -1.87
PRKDC-208ENST00000536710 TRAV19A0A0A6YYK7 116 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 RAD51BO15315 384 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 MPDU1O75352 247 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 SEMA3DO95025 777 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 CD37P11049 281 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 PMCHP20382 165 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 TAS2R46P59540 309 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 TFDP2Q14188 446 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 RPEL1Q2QD12 228 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 NANOGP8Q6NSW7 305 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 ULK3Q6PHR2 472 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 SAXO1Q8IYX7 474 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 C15orf56Q8N910 161 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 ISOC2Q96AB3 205 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 ZNF414Q96IQ9 312 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 CAMK2N2Q96S95 79 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 HSD17B10Q99714 261 aaKnown RBP3.39□□□□□ -1.87
PRKDC-208ENST00000536710 SLIRPQ9GZT3 109 aaKnown RBP3.39□□□□□ -1.87
PRKDC-208ENST00000536710 NAA50Q9GZZ1 169 aaKnown RBP3.39□□□□□ -1.87
PRKDC-208ENST00000536710 OR2AG1Q9H205 316 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 FANCEQ9HB96 536 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 TMEM27Q9HBJ8 222 aa3.39□□□□□ -1.87
PRKDC-208ENST00000536710 ZNF282Q9UDV7 671 aaPredicted RBP3.39□□□□□ -1.87
PRKDC-208ENST00000536710 COL22A1Q8NFW1 1626 aaPredicted RBP3.39□□□□□ -1.87
PRKDC-208ENST00000536710 IGKV2D-24A0A075B6R9 120 aa3.38□□□□□ -1.87
PRKDC-208ENST00000536710 ARPC4-TTLL3A0A0A6YYG9 625 aa3.38□□□□□ -1.87
PRKDC-208ENST00000536710 TRDMT1O14717 391 aaKnown RBP3.38□□□□□ -1.87
PRKDC-208ENST00000536710 B4GALT5O43286 388 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms