RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 FBXW12Q6X9E4 464 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 AQP11Q8NBQ7 271 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 OR52E2Q8NGJ4 325 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 ZFAND2BQ8WV99 257 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 PTP4A1Q93096 173 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 CCDC124Q96CT7 223 aaKnown RBP10.56□□□□□ -0.72
PRKDC-207ENST00000536483 VCX3BQ9H321 246 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 RPRD1BQ9NQG5 326 aaKnown RBP10.56□□□□□ -0.72
PRKDC-207ENST00000536483 MRPL22Q9NWU5 206 aaKnown RBP10.56□□□□□ -0.72
PRKDC-207ENST00000536483 STARD10Q9Y365 291 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 GRIP1Q9Y3R0 1128 aa10.56□□□□□ -0.72
PRKDC-207ENST00000536483 DYSFO75923 2080 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 WIPF1O43516 503 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 SPRY1O43609 319 aaPredicted RBP10.55□□□□□ -0.72
PRKDC-207ENST00000536483 CST1P01037 141 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 IGHV1-46P01743 117 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 CENPAP49450 140 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 LMO4P61968 165 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 ACTG1P63261 375 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 CCL8P80075 99 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 ZMAT1Q5H9K5 638 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 FAHD2BQ6P2I3 314 aaPredicted RBP10.55□□□□□ -0.72
PRKDC-207ENST00000536483 OR2T33Q8NG76 320 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 OR2T4Q8NH00 348 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 OR51F2Q8NH61 342 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 ZNF418Q8TF45 676 aaPredicted RBP10.55□□□□□ -0.72
PRKDC-207ENST00000536483 GIPC3Q8TF64 312 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 APOBEC3DQ96AK3 386 aaPredicted RBP10.55□□□□□ -0.72
PRKDC-207ENST00000536483 FAHD2AQ96GK7 314 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 FEVQ99581 238 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 TSSK6Q9BXA6 273 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 OR51B6Q9H340 312 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 RERGLQ9H628 205 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 PNRC2Q9NPJ4 139 aaKnown RBP10.55□□□□□ -0.72
PRKDC-207ENST00000536483 POMPQ9Y244 141 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 U3KQV3 271 aa10.55□□□□□ -0.72
PRKDC-207ENST00000536483 IGHV1-69-2A0A0G2JMI3 117 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 PLSCR5A0PG75 271 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 ZSCAN5BA6NJL1 495 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 CDC14BO60729 498 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 GPANK1O95872 356 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 OTX1P32242 354 aaPredicted RBP10.54□□□□□ -0.72
PRKDC-207ENST00000536483 BLVRAP53004 296 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 PPP1R8Q12972 351 aaKnown RBP10.54□□□□□ -0.72
PRKDC-207ENST00000536483 RCN1Q15293 331 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 MEP1BQ16820 701 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 CLEC12AQ5QGZ9 265 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 SPATA46Q5T0L3 261 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 SLC35F1Q5T1Q4 408 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 C1orf229Q6ZS94 237 aaPredicted RBP10.54□□□□□ -0.72
PRKDC-207ENST00000536483 SLC37A3Q8NCC5 494 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 SDR9C7Q8NEX9 313 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 OR10G2Q8NGC3 310 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 OR5L1Q8NGL2 311 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 OR4Q3Q8NH05 313 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 NRBF2Q96F24 287 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 NIPSNAP1Q9BPW8 284 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 C1QTNF5Q9BXJ0 243 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 POFUT1Q9H488 388 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 YY1AP1Q9H869 796 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 CMC2Q9NRP2 79 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 DDX28Q9NUL7 540 aaKnown RBP10.54□□□□□ -0.72
PRKDC-207ENST00000536483 PURGQ9UJV8 347 aaKnown RBP10.54□□□□□ -0.72
PRKDC-207ENST00000536483 PCDHB10Q9UN67 800 aa10.54□□□□□ -0.72
PRKDC-207ENST00000536483 TRAV20A0A0B4J274 112 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 AVPP01185 164 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 DBHP09172 617 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 COMPP49747 757 aaPredicted RBP10.53□□□□□ -0.72
PRKDC-207ENST00000536483 SCGB2A2Q13296 93 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 FLOT2Q14254 428 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 LINC01590Q5TEZ4 76 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 OTPQ5XKR4 325 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 CFAP77Q6ZQR2 320 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 RHOUQ7L0Q8 258 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 TMEM179BQ7Z7N9 219 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 PEG10Q86TG7 708 aaKnown RBP10.53□□□□□ -0.72
PRKDC-207ENST00000536483 C3orf56Q8N813 242 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 ICA1LQ8NDH6 482 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 ZNRF4Q8WWF5 429 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 SLC7A6Q92536 515 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
PRKDC-207ENST00000536483 GCDHQ92947 438 aaPredicted RBP10.53□□□□□ -0.72
PRKDC-207ENST00000536483 SLCO4A1Q96BD0 722 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 CMBLQ96DG6 245 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 ELMOD3Q96FG2 381 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 EGLN1Q9GZT9 426 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 MARCH7Q9H992 704 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 SAP30LQ9HAJ7 183 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 S100A14Q9HCY8 104 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 DECR2Q9NUI1 292 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 DNAJB9Q9UBS3 223 aa10.53□□□□□ -0.72
PRKDC-207ENST00000536483 NKX1-2Q9UD57 310 aaPredicted RBP10.53□□□□□ -0.72
PRKDC-207ENST00000536483 LOC105371242A0A075B767 164 aa10.52□□□□□ -0.73
PRKDC-207ENST00000536483 TMEM89A2RUT3 159 aa10.52□□□□□ -0.73
PRKDC-207ENST00000536483 PNPP00491 289 aa10.52□□□□□ -0.73
PRKDC-207ENST00000536483 IFNGP01579 166 aa10.52□□□□□ -0.73
PRKDC-207ENST00000536483 ACSM4P0C7M7 580 aa10.52□□□□□ -0.73
PRKDC-207ENST00000536483 ANXA8P13928 327 aa10.52□□□□□ -0.73
PRKDC-207ENST00000536483 EGR1P18146 543 aa10.52□□□□□ -0.73
PRKDC-207ENST00000536483 EPHA1P21709 976 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms