RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 S1PR5Q9H228 398 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GAL3ST2Q9H3Q3 398 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZDHHC6Q9H6R6 413 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SLC17A5Q9NRA2 495 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NLE1Q9NVX2 485 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZDHHC3Q9NYG2 299 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 UPB1Q9UBR1 384 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 HIF3AQ9Y2N7 669 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 RNF115Q9Y4L5 304 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ARHGAP21Q5T5U3 1957 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 CEP290O15078 2479 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 SLC22A31A6NKX4 558 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 AQP7P3A6NL99 342 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 NPIPB8E9PQR5 432 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 BHLHE40O14503 412 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 SURF4O15260 269 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 PLRG1O43660 514 aaKnown RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 B4GALT2O60909 372 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 DNAJB6O75190 326 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 RPP14O95059 124 aaKnown RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 TSPAN15O95858 294 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 TBX18O95935 607 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 PF4P02776 101 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 C8GP07360 202 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 IL6RP08887 468 aaPredicted RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 CST2P09228 141 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 EDNRAP25101 427 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 PCSK1P29120 753 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ALDH3B1P43353 468 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 PRKAG1P54619 331 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ERVFC1-1P60608 527 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 S100A10P60903 97 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ACSM2AQ08AH3 577 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 HSPB3Q12988 150 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 MAPK14Q16539 360 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ARHGAP11BQ3KRB8 267 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ARTNQ5T4W7 220 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ACSM2BQ68CK6 577 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 PWWP2BQ6NUJ5 590 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 LEG1Q6P5S2 330 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 CFAP161Q6P656 301 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ENPP7Q6UWV6 458 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 MBOAT2Q6ZWT7 520 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 TMPRSS7Q7RTY8 843 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ZNF573Q86YE8 665 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 SAXO1Q8IYX7 474 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 SLC30A7Q8NEW0 376 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 OR5R1Q8NH85 324 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 MFSD8Q8NHS3 518 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 APOBEC4Q8WW27 367 aaKnown RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 HAS2Q92819 552 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 TOMM40LQ969M1 308 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 EID2BQ96D98 161 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 MALSU1Q96EH3 234 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 PHYHIPLQ96FC7 376 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ULBP3Q9BZM4 244 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 SH3BGRL3Q9H299 93 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 CXorf36Q9H7Y0 433 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 Q9N2J8 555 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 DLL3Q9NYJ7 618 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 FLRT3Q9NZU0 649 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 B3GAT1Q9P2W7 334 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 MYOTQ9UBF9 498 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 TP73-AS1Q9UF72 201 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 KCNE5Q9UJ90 142 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 AKT3Q9Y243 479 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 VSIG4Q9Y279 399 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 HS3ST4Q9Y661 456 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 KPTNQ9Y664 436 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 C5orf42Q9H799 3197 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 FITM1A5D6W6 292 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 NKX6-3A6NJ46 265 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 OR4C45A6NMZ5 311 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 MCIDASD6RGH6 385 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 MTX2O75431 263 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 STATHP02808 62 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 SOD2P04179 222 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ASGR2P07307 311 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 GALTP07902 379 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 CELA3AP09093 270 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 PMELP40967 661 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ACAA2P42765 397 aaKnown RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 POLR2HP52434 150 aaKnown RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 EFNA5P52803 228 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ACTBP60709 375 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 RPS11P62280 158 aaKnown RBP eCLIP3.34□□□□□ -1.87
MCF2-210ENST00000536274 GNB2P62879 340 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ACTG1P63261 375 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 NTHL1P78549 312 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 COL10A1Q03692 680 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ZNF85Q03923 595 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 TLE4Q04727 773 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 RAB35Q15286 201 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 LDLRAD2Q5SZI1 272 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 HIST2H3PS2Q5TEC6 136 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 HACD4Q5VWC8 232 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 RNF219Q5W0B1 726 aaPredicted RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 BHLHA9Q7RTU4 235 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 P4HA3Q7Z4N8 544 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 TCEAL8Q8IYN2 117 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms