RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 UBIAD1Q9Y5Z9 338 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 ADGRL1O94910 1474 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 SYNJ2BP-COX16A0A087WUM0 186 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 SMIM26A0A096LP01 95 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 IGHV7-4-1A0A0J9YVY3 117 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 A0A1B0GW55 424 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 OR5H1A6NKK0 313 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 LYRM9A8MSI8 78 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 C16orf90A8MZG2 172 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 KRBOX1C9JBD0 128 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 SMKR1H3BMG3 65 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 CLOCKO15516 846 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 EIF4E2O60573 245 aaKnown RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 EIF1BO60739 113 aaKnown RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 NDUFB10O96000 172 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 CYB5R3P00387 301 aaPredicted RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 IGHV3-11P01762 117 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 P0C880 135 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DUX4L2P0CJ85 424 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DUX4L3P0CJ86 424 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DUX4L5P0CJ88 424 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DUX4L6P0CJ89 424 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DUX4L7P0CJ90 424 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 ATF6P18850 670 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 EIF1P41567 113 aaKnown RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 RBM34P42696 430 aaKnown RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 CDH6P55285 790 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 GFERP55789 205 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 EIF3EP60228 445 aaKnown RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 RPS11P62280 158 aaKnown RBP eCLIP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 PRR3P79522 188 aaKnown RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 FLI1Q01543 452 aaPredicted RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 SP4Q02446 784 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 PRKCDQ05655 676 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DDX39BQ13838 428 aaKnown RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DGCR6Q14129 220 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 SSX2Q16385 188 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 MRPL23Q16540 153 aaKnown RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 KRTAP6-3Q3LI67 103 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 UBE2UQ5VVX9 321 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 GUSBP11Q6P575 273 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DENND4AQ7Z401 1863 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 CMTM1Q8IZ96 169 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 ZNF101Q8IZC7 436 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 CSGALNACT2Q8N6G5 542 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 ZNF645Q8N7E2 425 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 SPANXA2-OT1Q8N9U9 137 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 C11orf72Q8NBR9 251 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 APCDD1LQ8NCL9 501 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 GPR26Q8NDV2 337 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 C1orf64Q8NEQ6 169 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 OR52E2Q8NGJ4 325 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 NUBPLQ8TB37 319 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 APH1BQ8WW43 257 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 WDR34Q96EX3 536 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 COL21A1Q96P44 957 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 RHOXF2Q9BQY4 288 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 CENPKQ9BS16 269 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 SHANK2-AS3Q9BTD1 123 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 ANGPTL4Q9BY76 406 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 FRMD8P1Q9BZ68 369 aaPredicted RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 ILKAPQ9H0C8 392 aaPredicted RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 RACGAP1Q9H0H5 632 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 DUX4Q9UBX2 424 aa1.19□□□□□ -2.22
BRCA2-205ENST00000533776 ZNF230Q9UIE0 474 aaPredicted RBP1.19□□□□□ -2.22
BRCA2-205ENST00000533776 MUC6Q6W4X9 2439 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 AKNAQ7Z591 1439 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 IGHV3-49A0A0A0MS15 119 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 IGHV3-72A0A0B4J1Y9 119 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 A0A0J9YXV3 536 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 TRIM64CA6NLI5 447 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 NCBP2LA6PVI3 153 aaKnown RBP1.18□□□□□ -2.22
BRCA2-205ENST00000533776 H7C1H1 209 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 K7EMT4 169 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 PLPP1O14494 284 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 FLOT1O75955 427 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 OR2J3O76001 311 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 GLSO94925 669 aaPredicted RBP1.18□□□□□ -2.22
BRCA2-205ENST00000533776 SNX4O95219 450 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 PAHP00439 452 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 TNFSF9P41273 254 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 SLC1A1P43005 524 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 PRLHRP49683 370 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 ACTR3P61158 418 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 IDI1Q13907 227 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 DMC1Q14565 340 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 NCF4Q15080 339 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 YIF1BQ5BJH7 314 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 TEX30Q5JUR7 227 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 C9orf135Q5VTT2 229 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 CASP12Q6UXS9 341 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 CERS6Q6ZMG9 384 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 NANOGNBQ7Z5D8 188 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 FAM228AQ86W67 206 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 CDH26Q8IXH8 852 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 FAM71AQ8IYT1 594 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 IQCKQ8N0W5 287 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 CBR4Q8N4T8 237 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 OR5T1Q8NG75 326 aa1.18□□□□□ -2.22
BRCA2-205ENST00000533776 OR51E1Q8TCB6 317 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms