RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SYT9Q86SS6 491 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ZBTB46Q86UZ6 589 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 GLCCI1Q86VQ1 547 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 GJC3Q8NFK1 279 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 SLC26A10Q8NG04 563 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ABHD4Q8TB40 342 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 DNAJC9Q8WXX5 260 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 SLC7A6Q92536 515 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 PITX2Q99697 317 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 TPK1Q9H3S4 243 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 RIBC2Q9H4K1 309 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 CMC2Q9NRP2 79 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 HIF1ANQ9NWT6 349 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 GRIP1Q9Y3R0 1128 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 ORC6Q9Y5N6 252 aa7.44□□□□□ -1.22
COPB1-210ENST00000533533 LOC100509620A0A075B734 347 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 ERICH4A6NGS2 130 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 SURF4O15260 269 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 SYNGR3O43761 229 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 EGR1P18146 543 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 GCH1P30793 250 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 RPS27P42677 84 aaKnown RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 SLC25A1P53007 311 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 ACTG1P63261 375 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 CDK5Q00535 292 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 GABPB1Q06547 395 aaPredicted RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 SCGB2A2Q13296 93 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 MAD2L1BPQ15013 274 aaPredicted RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 PTGES3Q15185 160 aaKnown RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 TAF13Q15543 124 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 KCNMB1Q16558 191 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 NKPD1Q17RQ9 610 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 MSMPQ1L6U9 139 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 CCDC92Q53HC0 331 aaPredicted RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 ELFN2Q5R3F8 820 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 ZNF362Q5T0B9 420 aaPredicted RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 LYPD4Q6UWN0 246 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 SPATC1Q76KD6 591 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 VASH1Q7L8A9 365 aaPredicted RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 LRP11Q86VZ4 500 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 ERI1Q8IV48 349 aaKnown RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 CPOQ8IVL8 374 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 OR6N2Q8NGY6 317 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 OR1F12Q8NHA8 337 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 CLDND2Q8NHS1 167 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 SYNPRQ8TBG9 265 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 ZNRF4Q8WWF5 429 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 MRPL24Q96A35 216 aaKnown RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 TMEM186Q96B77 213 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 ZMYND19Q96E35 227 aaPredicted RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 POM121L2Q96KW2 1035 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 C4orf45Q96LM5 186 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 CIB1Q99828 191 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 WACQ9BTA9 647 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 RBM4Q9BWF3 364 aaKnown RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 HCAR1Q9BXC0 346 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 PRRG3Q9BZD7 231 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 MRPL37Q9BZE1 423 aaKnown RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 BCL2L14Q9BZR8 327 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 MS4A5Q9H3V2 200 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 ELOVL3Q9HB03 270 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 S100A14Q9HCY8 104 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 CENPMQ9NSP4 180 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 MRPL22Q9NWU5 206 aaKnown RBP7.43□□□□□ -1.22
COPB1-210ENST00000533533 ENOPH1Q9UHY7 261 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 LHFPL6Q9Y693 200 aa7.43□□□□□ -1.22
COPB1-210ENST00000533533 OR6C6A6NF89 314 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 FAM157AC9JC47 383 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 F5H5K5 113 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 H3BNX3 289 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 M0R129 80 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 M0R233 179 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 ZNF593O00488 134 aaPredicted RBP7.42□□□□□ -1.22
COPB1-210ENST00000533533 SNAP29O95721 258 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 CLPTM1O96005 669 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 HPXP02790 462 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 MSMBP08118 114 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 DBHP09172 617 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 ACHEP22303 614 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 COL8A2P25067 703 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 GSTT1P30711 240 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 WNT5AP41221 380 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 ALDH3B1P43353 468 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 GPR6P46095 362 aaPredicted RBP7.42□□□□□ -1.22
COPB1-210ENST00000533533 ENTPD1P49961 510 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 BLVRAP53004 296 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 KLF3P57682 345 aaPredicted RBP7.42□□□□□ -1.22
COPB1-210ENST00000533533 PPP1CBP62140 327 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 ESRRGP62508 458 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 ZNF718Q3SXZ3 478 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 KDM4DQ6B0I6 523 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 SLC18B1Q6NT16 456 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 CFAP77Q6ZQR2 320 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 RFPL4BQ6ZWI9 263 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 DCXRQ7Z4W1 244 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 ZNF101Q8IZC7 436 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 PARP8Q8N3A8 854 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 C3orf56Q8N813 242 aa7.42□□□□□ -1.22
COPB1-210ENST00000533533 SGMS2Q8NHU3 365 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms