RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ATG16L2Q8NAA4 619 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 OR2T33Q8NG76 320 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 OR8D4Q8NGM9 314 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 SPATA3Q8NHX4 192 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 ZNF582Q96NG8 517 aaPredicted RBP14.6□□□□□ -0.07
PHRF1-204ENST00000532550 DDOQ99489 341 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 ATF6BQ99941 703 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 MRPL22Q9NWU5 206 aaKnown RBP14.6□□□□□ -0.07
PHRF1-204ENST00000532550 VNN3Q9NY84 501 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 FAM53CQ9NYF3 392 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 IL19Q9UHD0 177 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 WNK2Q9Y3S1 2297 aa14.6□□□□□ -0.07
PHRF1-204ENST00000532550 TRAV20A0A0B4J274 112 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 ISPDA4D126 451 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 AQP12BA6NM10 295 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 TPTEP56180 551 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 SPRNQ5BIV9 151 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 ZNF362Q5T0B9 420 aaPredicted RBP14.59□□□□□ -0.07
PHRF1-204ENST00000532550 OR2T2Q6IF00 324 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 SLC27A4Q6P1M0 643 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 CFAP77Q6ZQR2 320 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 Q6ZR03 302 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 AQP12AQ8IXF9 295 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 SLC37A3Q8NCC5 494 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 OR8G5Q8NG78 346 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 OR10G2Q8NGC3 310 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 OR13G1Q8NGZ3 307 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 GIPC3Q8TF64 312 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 GAL3ST1Q99999 423 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 HCAR1Q9BXC0 346 aa14.59□□□□□ -0.07
PHRF1-204ENST00000532550 TVP23AA6NH52 213 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 SOX14O95416 240 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 IFNGP01579 166 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 LCATP04180 440 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 ACSM4P0C7M7 580 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 HOXB6P17509 224 aaKnown RBP14.58□□□□□ -0.08
PHRF1-204ENST00000532550 FMO3P31513 532 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 ERFP50548 548 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 DNAL1Q4LDG9 190 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 FAHD2BQ6P2I3 314 aaPredicted RBP14.58□□□□□ -0.08
PHRF1-204ENST00000532550 ADGRG5Q8IZF4 528 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 OR51L1Q8NGJ5 315 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 CANT1Q8WVQ1 401 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 FAHD2AQ96GK7 314 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 FEVQ99581 238 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 C1QTNF5Q9BXJ0 243 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 TMEM106BQ9NUM4 274 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 ARMC1Q9NVT9 282 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 PPP1R3CQ9UQK1 317 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 NPTNQ9Y639 398 aa14.58□□□□□ -0.08
PHRF1-204ENST00000532550 DHRS12A0PJE2 317 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 PLPP2O43688 288 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 IGHV2-5P01817 119 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 SBK2P0C263 348 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 SELEP16581 610 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 MALLQ13021 153 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 CRMP1Q14194 572 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 KRTAP27-1Q3LI81 207 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 CD300LDQ6UXZ3 194 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 COLCA1Q6ZS62 124 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 NAA40Q86UY6 237 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 OR9Q1Q8NGQ5 310 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 OR4Q3Q8NH05 313 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 TEX47Q8TBZ9 253 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 ITLN1Q8WWA0 313 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 ZNRF4Q8WWF5 429 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 SPTSSAQ969W0 71 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 MAP6Q96JE9 813 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 OR2V2Q96R30 315 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 NIPSNAP1Q9BPW8 284 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 RBM4Q9BWF3 364 aaKnown RBP14.57□□□□□ -0.08
PHRF1-204ENST00000532550 WDR76Q9H967 626 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 UBAP1Q9NZ09 502 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 PCDHB10Q9UN67 800 aa14.57□□□□□ -0.08
PHRF1-204ENST00000532550 RIIAD1A6NNX1 92 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 H3BN98 237 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 DEAF1O75398 565 aaPredicted RBP14.56□□□□□ -0.08
PHRF1-204ENST00000532550 RPS27P42677 84 aaKnown RBP14.56□□□□□ -0.08
PHRF1-204ENST00000532550 BLVRAP53004 296 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 SLC25A1P53007 311 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 FLOT2Q14254 428 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 LIPNQ5VXI9 398 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 SPATA24Q86W54 205 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 ZNF283Q8N7M2 679 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 ST7LQ8TDW4 575 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 YY1AP1Q9H869 796 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 PNRC2Q9NPJ4 139 aaKnown RBP14.56□□□□□ -0.08
PHRF1-204ENST00000532550 TMEM100Q9NV29 134 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 METRNQ9UJH8 293 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 TANC2Q9HCD6 1990 aa14.56□□□□□ -0.08
PHRF1-204ENST00000532550 IQCF6A8MYZ5 107 aa14.55□□□□□ -0.08
PHRF1-204ENST00000532550 M0R135 149 aa14.55□□□□□ -0.08
PHRF1-204ENST00000532550 ZNF593O00488 134 aaPredicted RBP14.55□□□□□ -0.08
PHRF1-204ENST00000532550 E2F6O75461 281 aa14.55□□□□□ -0.08
PHRF1-204ENST00000532550 GYPBP06028 91 aa14.55□□□□□ -0.08
PHRF1-204ENST00000532550 SPARCP09486 303 aa14.55□□□□□ -0.08
PHRF1-204ENST00000532550 ZNF3P17036 446 aa14.55□□□□□ -0.08
PHRF1-204ENST00000532550 SPI1P17947 270 aa14.55□□□□□ -0.08
PHRF1-204ENST00000532550 SLC6A9P48067 706 aa14.55□□□□□ -0.08
PHRF1-204ENST00000532550 SRP9P49458 86 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms