RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 OR5V1Q9UGF6 321 aa10.86□□□□□ -0.67
CHD7-211ENST00000532149 RAB22AQ9UL26 194 aa10.86□□□□□ -0.67
CHD7-211ENST00000532149 RBMX2Q9Y388 322 aaKnown RBP10.86□□□□□ -0.67
CHD7-211ENST00000532149 EML6Q6ZMW3 1958 aa10.86□□□□□ -0.67
CHD7-211ENST00000532149 IGKV1D-43A0A0B4J1Z2 117 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 MEIOCA2RUB1 952 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ZNF814B7Z6K7 855 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 RPL36A-HNRNPH2H7BZ11 118 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 PRAF2O60831 178 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 WDPCPO95876 746 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 TTRP02766 147 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 MAS1P04201 325 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ITGB2P05107 769 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ACSM4P0C7M7 580 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 FCGR2AP12318 317 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 GABRA1P14867 456 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 CPN1P15169 458 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ARSBP15848 533 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ZNF708P17019 499 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ZNF20P17024 532 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ADRA2CP18825 462 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 OTX1P32242 354 aaPredicted RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 RPS27P42677 84 aaKnown RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 EIF1AXP47813 144 aaKnown RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 TPTEP56180 551 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ACTBP60709 375 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ACTG1P63261 375 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 PLGLB1Q02325 96 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 SNTB2Q13425 540 aaKnown RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 RAB35Q15286 201 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 SGCAQ16586 387 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 WIPI1Q5MNZ9 446 aaPredicted RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 ZNF529Q6P280 563 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ZNF627Q7L945 461 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 TMPRSS7Q7RTY8 843 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 OR2W3Q7Z3T1 314 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 LINC00346Q8IVM7 164 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 SULF2Q8IWU5 870 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 PLPP7Q8NBV4 271 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 OR5H6Q8NGV6 325 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 YIPF5Q969M3 257 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 SCMH1Q96GD3 660 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 POM121Q96HA1 1249 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 TECTBQ96PL2 329 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ABHD1Q96SE0 405 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 GFI1Q99684 422 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 RBM24Q9BX46 236 aaKnown RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 TTTY12Q9BZ98 90 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 SLC25A18Q9H1K4 315 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 METTL17Q9H7H0 456 aaPredicted RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 PARD6AQ9NPB6 346 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 DEPPQ9NTK1 212 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ING1Q9UK53 422 aaPredicted RBP10.85□□□□□ -0.67
CHD7-211ENST00000532149 ITGB1BP2Q9UKP3 347 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 SLC5A6Q9Y289 635 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 TIMM10BQ9Y5J6 103 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 KIAA1549Q9HCM3 1950 aa10.85□□□□□ -0.67
CHD7-211ENST00000532149 ZNF318Q5VUA4 2279 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 TRAV8-7A0A075B6U6 113 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 EEF1E1O43324 174 aaKnown RBP10.84□□□□□ -0.67
CHD7-211ENST00000532149 CXCL13O43927 109 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 MRPL33O75394 65 aaKnown RBP10.84□□□□□ -0.67
CHD7-211ENST00000532149 RBBP9O75884 186 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 CHRM2P08172 466 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 CSF1P09603 554 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 COX5BP10606 129 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 PSKH1P11801 424 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 THBS4P35443 961 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 KIR2DL3P43628 341 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 CX3CR1P49238 355 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 CLDN15P56746 228 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 MFGE8Q08431 387 aaPredicted RBP10.84□□□□□ -0.67
CHD7-211ENST00000532149 C19orf57Q0VDD7 668 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 SF3B4Q15427 424 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHD7-211ENST00000532149 RSBN1Q5VWQ0 802 aaPredicted RBP10.84□□□□□ -0.67
CHD7-211ENST00000532149 CARD17Q5XLA6 110 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 SPINK14Q6IE38 97 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 IGFL2Q6UWQ7 119 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 ZNF813Q6ZN06 617 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 UTS2BQ765I0 119 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 ADGRE4PQ86SQ3 457 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 ZNF283Q8N7M2 679 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 DEFB124Q8NES8 71 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 OR1M1Q8NGA1 313 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 SNRNP27Q8WVK2 155 aaKnown RBP10.84□□□□□ -0.67
CHD7-211ENST00000532149 NABP1Q96AH0 204 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 ZFP3Q96NJ6 502 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 ZNF385AQ96PM9 386 aaKnown RBP10.84□□□□□ -0.67
CHD7-211ENST00000532149 ZNF416Q9BWM5 594 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 CCDC86Q9H6F5 360 aaKnown RBP10.84□□□□□ -0.67
CHD7-211ENST00000532149 EXO5Q9H790 373 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 BCO1Q9HAY6 547 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
CHD7-211ENST00000532149 ZNF175Q9Y473 711 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 DOCK10Q96BY6 2186 aa10.84□□□□□ -0.67
CHD7-211ENST00000532149 ALPK2Q86TB3 2170 aa10.83□□□□□ -0.68
CHD7-211ENST00000532149 OR6C6A6NF89 314 aa10.83□□□□□ -0.68
CHD7-211ENST00000532149 GGT3PA6NGU5 568 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms